RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TMEM31Q5JXX7 168 aa25.39■■□□□ 1.66
TRAPPC4-208ENST00000527680 BICD2Q8TD16 824 aa25.39■■□□□ 1.66
TRAPPC4-208ENST00000527680 PLVAPQ9BX97 442 aa25.39■■□□□ 1.66
TRAPPC4-208ENST00000527680 SLC26A6Q9BXS9 759 aa25.39■■□□□ 1.66
TRAPPC4-208ENST00000527680 IGFLR1Q9H665 355 aa25.39■■□□□ 1.66
TRAPPC4-208ENST00000527680 KDM3AQ9Y4C1 1321 aa25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 REC8O95072 547 aa25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 PSAPP07602 524 aa25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 LINC00271P0C7V0 271 aa25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 SETQ01105 290 aaPredicted RBP25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 ODR4Q5SWX8 454 aa25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 ZNF746Q6NUN9 644 aaPredicted RBP25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 CMTR2Q8IYT2 770 aaKnown RBP25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 KIAA0319LQ8IZA0 1049 aa25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 METTL13Q8N6R0 699 aa25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 KHSRPQ92945 711 aaKnown RBP eCLIP25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 LRFN3Q9BTN0 628 aa25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 CDHR5Q9HBB8 845 aa25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 PCDHB7Q9Y5E2 793 aa25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 MRPL42Q9Y6G3 142 aaKnown RBP25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 COL1A2P08123 1366 aa25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 MYH9P35579 1960 aaKnown RBP25.38■■□□□ 1.65
TRAPPC4-208ENST00000527680 DENND3A2RUS2 1198 aa25.37■■□□□ 1.65
TRAPPC4-208ENST00000527680 CCT2P78371 535 aaKnown RBP25.37■■□□□ 1.65
TRAPPC4-208ENST00000527680 RASGRP4Q8TDF6 673 aa25.37■■□□□ 1.65
TRAPPC4-208ENST00000527680 CRYGNQ8WXF5 182 aa25.37■■□□□ 1.65
TRAPPC4-208ENST00000527680 BBXQ8WY36 941 aaPredicted RBP25.37■■□□□ 1.65
TRAPPC4-208ENST00000527680 PPP1R16BQ96T49 567 aa25.37■■□□□ 1.65
TRAPPC4-208ENST00000527680 PLAGL2Q9UPG8 496 aa25.37■■□□□ 1.65
TRAPPC4-208ENST00000527680 NOC2LQ9Y3T9 749 aaKnown RBP25.37■■□□□ 1.65
TRAPPC4-208ENST00000527680 PCDHA10Q9Y5I2 948 aa25.37■■□□□ 1.65
TRAPPC4-208ENST00000527680 ATP4AP20648 1035 aa25.36■■□□□ 1.65
TRAPPC4-208ENST00000527680 SPOUT1Q5T280 376 aaKnown RBP25.36■■□□□ 1.65
TRAPPC4-208ENST00000527680 SMAP1Q8IYB5 467 aaPredicted RBP25.36■■□□□ 1.65
TRAPPC4-208ENST00000527680 CCDC148Q8NFR7 591 aa25.36■■□□□ 1.65
TRAPPC4-208ENST00000527680 TMX1Q9H3N1 280 aa25.36■■□□□ 1.65
TRAPPC4-208ENST00000527680 RNF216Q9NWF9 866 aaPredicted RBP25.36■■□□□ 1.65
TRAPPC4-208ENST00000527680 GABBR1Q9UBS5 961 aa25.36■■□□□ 1.65
TRAPPC4-208ENST00000527680 GPR182O15218 404 aa25.35■■□□□ 1.65
TRAPPC4-208ENST00000527680 CRIPAKQ8N1N5 446 aa25.35■■□□□ 1.65
TRAPPC4-208ENST00000527680 P2RX5Q93086 422 aa25.35■■□□□ 1.65
TRAPPC4-208ENST00000527680 ADAM2Q99965 735 aa25.35■■□□□ 1.65
TRAPPC4-208ENST00000527680 RNF26Q9BY78 433 aaPredicted RBP25.35■■□□□ 1.65
TRAPPC4-208ENST00000527680 VPS54Q9P1Q0 977 aa25.35■■□□□ 1.65
TRAPPC4-208ENST00000527680 ST3GAL5Q9UNP4 418 aa25.35■■□□□ 1.65
TRAPPC4-208ENST00000527680 MAFBQ9Y5Q3 323 aaPredicted RBP25.35■■□□□ 1.65
TRAPPC4-208ENST00000527680 PI4K2BG5E9Z4 385 aa25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 SARSP49591 514 aaKnown RBP25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 GATMP50440 423 aa25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 NLRP5P59047 1200 aa25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 HYAL1Q12794 435 aa25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 CLUL1Q15846 466 aa25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 KIZQ2M2Z5 673 aa25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 NAALADL2Q58DX5 795 aa25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 FBXL16Q8N461 479 aa25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 KLHL23Q8NBE8 558 aa25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 PPP2R3CQ969Q6 453 aa25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 ERVK-5Q9HDB9 667 aa25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 CEP131Q9UPN4 1083 aa25.34■■□□□ 1.65
TRAPPC4-208ENST00000527680 FAM86C2PA6NEL3 165 aa25.33■■□□□ 1.65
TRAPPC4-208ENST00000527680 ZBTB42B2RXF5 422 aa25.33■■□□□ 1.65
TRAPPC4-208ENST00000527680 MMP1P03956 469 aa25.33■■□□□ 1.65
TRAPPC4-208ENST00000527680 VTNP04004 478 aa25.33■■□□□ 1.65
TRAPPC4-208ENST00000527680 IFNAR1P17181 557 aa25.33■■□□□ 1.65
TRAPPC4-208ENST00000527680 PDIA3P30101 505 aaKnown RBP25.33■■□□□ 1.65
TRAPPC4-208ENST00000527680 CRYBB1P53674 252 aaPredicted RBP25.33■■□□□ 1.65
TRAPPC4-208ENST00000527680 NTRK3Q16288 839 aa25.33■■□□□ 1.65
TRAPPC4-208ENST00000527680 OSMRQ99650 979 aa25.33■■□□□ 1.65
TRAPPC4-208ENST00000527680 NCOA5Q9HCD5 579 aaKnown RBP25.33■■□□□ 1.65
TRAPPC4-208ENST00000527680 MGEA5O60502 916 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 C22orf31O95567 290 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 ITGB1P05556 798 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 CIITAP33076 1130 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 LTBRP36941 435 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 COL19A1Q14993 1142 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 FAM43BQ6ZT52 329 aaPredicted RBP25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 SLC24A5Q71RS6 500 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 TRIM22Q8IYM9 498 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 SPPL3Q8TCT6 385 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 TMEM40Q8WWA1 233 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 AGXT2Q9BYV1 514 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 C1orf112Q9NSG2 853 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 NRBP2Q9NSY0 501 aa25.32■■□□□ 1.64
TRAPPC4-208ENST00000527680 TBKBP1A7MCY6 615 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 WDR64B1ANS9 1081 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 MAGEB2O15479 319 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 GPR37L1O60883 481 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 TMOD1P28289 359 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 GTF2F1P35269 517 aaKnown RBP eCLIP25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 SSRP1Q08945 709 aaKnown RBP25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 CTC1Q2NKJ3 1217 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 EFCAB12Q6NXP0 572 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 RUFY3Q7L099 469 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 MICAL1Q8TDZ2 1067 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 POF1BQ8WVV4 589 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 FAM122AQ96E09 287 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 FAM167AQ96KS9 214 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 AAASQ9NRG9 546 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 DISC1Q9NRI5 854 aa25.31■■□□□ 1.64
TRAPPC4-208ENST00000527680 RGS18Q9NS28 235 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms