RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 NME8Q8N427 588 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 OXER1Q8TDS5 423 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 ATXN2LQ8WWM7 1075 aaKnown RBP11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 BBXQ8WY36 941 aaPredicted RBP11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 TNPO1Q92973 898 aaKnown RBP11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 YME1L1Q96TA2 773 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 RIT2Q99578 217 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 RC3H2Q9HBD1 1191 aaKnown RBP11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 DISC1Q9NRI5 854 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 PADI3Q9ULW8 664 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 NOC2LQ9Y3T9 749 aaKnown RBP11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 WDR81Q562E7 1941 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 MYH9P35579 1960 aaKnown RBP11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 IGSF9BQ9UPX0 1349 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 COL4A6Q14031 1691 aa11.81□□□□□ -0.52
PRPF40B-204ENST00000527253 WDR64B1ANS9 1081 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 CHMP2AO43633 222 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 GAS7O60861 476 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 STBD1O95210 358 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 MRPS5P82675 430 aaKnown RBP11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 ST3GAL1Q11201 340 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 EPC2Q52LR7 807 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 GALNT17Q6IS24 598 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 CKAP2LQ8IYA6 745 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 LINC01465Q8N7H1 131 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 FBXO22Q8NEZ5 403 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 ETNPPLQ8TBG4 499 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 ZNF689Q96CS4 500 aaPredicted RBP11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 PPP1R16BQ96T49 567 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 ERVK-5Q9HDB9 667 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 LMCD1Q9NZU5 365 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 SQORQ9Y6N5 450 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 REV3LO60673 3130 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 STK36Q9NRP7 1315 aa11.8□□□□□ -0.52
PRPF40B-204ENST00000527253 FAM205CA6NFA0 338 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 SLC37A4O43826 429 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 MGEA5O60502 916 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 GPR32O75388 356 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 DGKIO75912 1065 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 RPLP2P05387 115 aaKnown RBP11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 BMP1P13497 986 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 KCNQ1P51787 676 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 NONOQ15233 471 aaKnown RBP eCLIP11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 SKIV2LQ15477 1246 aaKnown RBP11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 LRCH2Q5VUJ6 765 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 MOXD1Q6UVY6 613 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 KRT25Q7Z3Z0 450 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 TMEM192Q8IY95 271 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 FAM177A1Q8N128 213 aaPredicted RBP11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 CEP89Q96ST8 783 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 TEKT3Q9BXF9 490 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 C22orf23Q9BZE7 217 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 ORC3Q9UBD5 711 aaPredicted RBP11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 GINS2Q9Y248 185 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 SAMM50Q9Y512 469 aa11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 SPTBN5Q9NRC6 3674 aaKnown RBP11.79□□□□□ -0.52
PRPF40B-204ENST00000527253 TMEM150BA6NC51 233 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 H3BNC9 293 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 M0QZ92 97 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 EML1O00423 815 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 CDKL5O76039 1030 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 VTNP04004 478 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 OATP04181 439 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 GATMP50440 423 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 CLCN3P51790 818 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 NEK4P51957 841 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 JAK3P52333 1124 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 PRKCEQ02156 737 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 PAK2Q13177 524 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 ANKRD1Q15327 319 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 TARBP2Q15633 366 aaKnown RBP11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 KIZQ2M2Z5 673 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 LETM2Q2VYF4 491 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 POTEDQ86YR6 584 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 LRRC71Q8N4P6 559 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 METTL13Q8N6R0 699 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 NSUN7Q8NE18 718 aaKnown RBP11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 TNFRSF25Q93038 417 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 GTF3C6Q969F1 213 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 OSMRQ99650 979 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 TSPYL2Q9H2G4 693 aaPredicted RBP11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 ADAMTS10Q9H324 1103 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 DDX25Q9UHL0 483 aaKnown RBP11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 ST3GAL5Q9UNP4 418 aa11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 TCF20Q9UGU0 1960 aaKnown RBP11.78□□□□□ -0.52
PRPF40B-204ENST00000527253 MAGEB2O15479 319 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 JAK2O60674 1132 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 CENPBP07199 599 aaPredicted RBP11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 SFNP31947 248 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 CRYBB1P53674 252 aaPredicted RBP11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 NFX1Q12986 1120 aaKnown RBP11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 NR5A1Q13285 461 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 DRP2Q13474 957 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 GPM6BQ13491 265 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 EFCAB12Q6NXP0 572 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 PIK3AP1Q6ZUJ8 805 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 MIER3Q7Z3K6 550 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 FAM228AQ86W67 206 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 FIBCD1Q8N539 461 aa11.77□□□□□ -0.53
PRPF40B-204ENST00000527253 ADAMTS19Q8TE59 1207 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms