RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ARVCFO00192 962 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 GADD45BO75293 160 aaPredicted RBP18.44■□□□□ 0.54
CAPN1-205ENST00000526954 EYA4O95677 639 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 RARRES1P49788 294 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 CDK7P50613 346 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 ADAM17P78536 824 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 PPFIA1Q13136 1202 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 E2F4Q16254 413 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 NAALADL2Q58DX5 795 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 C1orf53Q5VUE5 145 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 TRMT1LQ7Z2T5 733 aaKnown RBP18.44■□□□□ 0.54
CAPN1-205ENST00000526954 NECAB2Q7Z6G3 386 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 IQUBQ8NA54 791 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 PAWRQ96IZ0 340 aaKnown RBP18.44■□□□□ 0.54
CAPN1-205ENST00000526954 CUEDC2Q9H467 287 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 GOLPH3LQ9H4A5 285 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 CYP26B1Q9NR63 512 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 BLOC1S4Q9NUP1 217 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 HDAC6Q9UBN7 1215 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 GTF2IRD1Q9UHL9 959 aa18.44■□□□□ 0.54
CAPN1-205ENST00000526954 A0A087WWV3 80 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 TMEM150BA6NC51 233 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 POLR2DO15514 142 aaKnown RBP18.43■□□□□ 0.54
CAPN1-205ENST00000526954 NDUFA8P51970 172 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 CHMP4BP1P59074 171 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 SNX17Q15036 470 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 GRIK4Q16099 956 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 XKR9Q5GH70 373 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 SLC39A5Q6ZMH5 540 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 PDILTQ8N807 584 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 RAD54LQ92698 747 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 CEP170P1Q96L14 293 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 PANK2Q9BZ23 570 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 USP25Q9UHP3 1055 aa18.43■□□□□ 0.54
CAPN1-205ENST00000526954 EVPLQ92817 2033 aa18.42■□□□□ 0.54
CAPN1-205ENST00000526954 C17orf102A2RUQ5 167 aa18.42■□□□□ 0.54
CAPN1-205ENST00000526954 MBLAC1A4D2B0 266 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-205ENST00000526954 GNAT1P11488 350 aa18.42■□□□□ 0.54
CAPN1-205ENST00000526954 STAT6P42226 847 aa18.42■□□□□ 0.54
CAPN1-205ENST00000526954 SYKP43405 635 aa18.42■□□□□ 0.54
CAPN1-205ENST00000526954 NPEPPSP55786 919 aa18.42■□□□□ 0.54
CAPN1-205ENST00000526954 MARCH8Q5T0T0 291 aa18.42■□□□□ 0.54
CAPN1-205ENST00000526954 PLA2G4FQ68DD2 849 aa18.42■□□□□ 0.54
CAPN1-205ENST00000526954 SYT2Q8N9I0 419 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-205ENST00000526954 ENGASEQ8NFI3 743 aa18.42■□□□□ 0.54
CAPN1-205ENST00000526954 LMBR1Q8WVP7 490 aa18.42■□□□□ 0.54
CAPN1-205ENST00000526954 BHMT2Q9H2M3 363 aa18.42■□□□□ 0.54
CAPN1-205ENST00000526954 SETD4Q9NVD3 440 aa18.42■□□□□ 0.54
CAPN1-205ENST00000526954 CCDC85CA6NKD9 419 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 MAGEB2O15479 319 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 PLA2G4BP0C869 781 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 MCM4P33991 863 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 SLC12A3P55017 1021 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 FAM160A1Q05DH4 1040 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 HIC1Q14526 733 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 MTERF2Q49AM1 385 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 FAM47CQ5HY64 1035 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 EXOC8Q8IYI6 725 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 FMR1NBQ8N0W7 255 aaPredicted RBP18.41■□□□□ 0.54
CAPN1-205ENST00000526954 PPP1R13LQ8WUF5 828 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 TRAPPC12Q8WVT3 735 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 LARP4BQ92615 738 aaKnown RBP18.41■□□□□ 0.54
CAPN1-205ENST00000526954 DHX33Q9H6R0 707 aaKnown RBP18.41■□□□□ 0.54
CAPN1-205ENST00000526954 MAGEF1Q9HAY2 307 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 MROH7Q68CQ1 1323 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 DNAH12Q6ZR08 3092 aa18.41■□□□□ 0.54
CAPN1-205ENST00000526954 IGKV6-21A0A0C4DH24 114 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 ARHGEF35A5YM69 484 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 MAFO75444 373 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-205ENST00000526954 DGAT1O75907 488 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 ZNF202O95125 648 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 C22orf31O95567 290 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 SLFN14P0C7P3 912 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 KLRC1P26715 233 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 RFC5P40937 340 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 SNW1Q13573 536 aaKnown RBP18.4■□□□□ 0.54
CAPN1-205ENST00000526954 MCM6Q14566 821 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 TPRNQ4KMQ1 711 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 GDF6Q6KF10 455 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-205ENST00000526954 PADI6Q6TGC4 694 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 MTHFD1LQ6UB35 978 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 ANKRD33Q7Z3H0 272 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 DHX58Q96C10 678 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 CCDC43Q96MW1 224 aaKnown RBP18.4■□□□□ 0.54
CAPN1-205ENST00000526954 SH2D3AQ9BRG2 576 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 PDLIM7Q9NR12 457 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 KCND2Q9NZV8 630 aa18.4■□□□□ 0.54
CAPN1-205ENST00000526954 ACTN4O43707 911 aaKnown RBP18.39■□□□□ 0.53
CAPN1-205ENST00000526954 LIG1P18858 919 aa18.39■□□□□ 0.53
CAPN1-205ENST00000526954 SOX10P56693 466 aa18.39■□□□□ 0.53
CAPN1-205ENST00000526954 IGBP1P78318 339 aa18.39■□□□□ 0.53
CAPN1-205ENST00000526954 TBC1D8BQ0IIM8 1120 aa18.39■□□□□ 0.53
CAPN1-205ENST00000526954 SV2BQ7L1I2 683 aa18.39■□□□□ 0.53
CAPN1-205ENST00000526954 FAM126BQ8IXS8 530 aa18.39■□□□□ 0.53
CAPN1-205ENST00000526954 TOX2Q96NM4 488 aa18.39■□□□□ 0.53
CAPN1-205ENST00000526954 CTAGE1Q96RT6 745 aa18.39■□□□□ 0.53
CAPN1-205ENST00000526954 JPH2Q9BR39 696 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-205ENST00000526954 KBTBD4Q9NVX7 518 aa18.39■□□□□ 0.53
CAPN1-205ENST00000526954 TUBE1Q9UJT0 475 aa18.39■□□□□ 0.53
CAPN1-205ENST00000526954 PCDHA2Q9Y5H9 948 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms