RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 CEP55Q53EZ4 464 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 RNF20Q5VTR2 975 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 FAM160B1Q5W0V3 765 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 MTHFD1LQ6UB35 978 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 PLPPR4Q7Z2D5 763 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 ZNF713Q8N859 430 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-204ENST00000526468 KLHL23Q8NBE8 558 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 POF1BQ8WVV4 589 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 TMEM260Q9NX78 707 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 TCEAL9Q9UHQ7 104 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 NAP1L2Q9ULW6 460 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-204ENST00000526468 PCDHGC5Q9Y5F6 944 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 KDM3AQ9Y4C1 1321 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 DENND3A2RUS2 1198 aa13.34□□□□□ -0.27
CAPN1-204ENST00000526468 FOSP01100 380 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-204ENST00000526468 SREBF1P36956 1147 aa13.34□□□□□ -0.27
CAPN1-204ENST00000526468 SLC26A2P50443 739 aa13.34□□□□□ -0.27
CAPN1-204ENST00000526468 CAMK1Q14012 370 aa13.34□□□□□ -0.27
CAPN1-204ENST00000526468 NAALADL2Q58DX5 795 aa13.34□□□□□ -0.27
CAPN1-204ENST00000526468 RBM23Q86U06 439 aaKnown RBP13.34□□□□□ -0.27
CAPN1-204ENST00000526468 RTN4RL1Q86UN2 441 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-204ENST00000526468 CCDC60Q8IWA6 550 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-204ENST00000526468 EFHBQ8N7U6 833 aa13.34□□□□□ -0.27
CAPN1-204ENST00000526468 ATP8B4Q8TF62 1192 aa13.34□□□□□ -0.27
CAPN1-204ENST00000526468 TMX1Q9H3N1 280 aa13.34□□□□□ -0.27
CAPN1-204ENST00000526468 BARX2Q9UMQ3 279 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-204ENST00000526468 KLF18A0A0U1RQI7 1052 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 TBKBP1A7MCY6 615 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 RPS6KA5O75582 802 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 CCNE2O96020 404 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 PTMSP20962 102 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 SARSP49591 514 aaKnown RBP13.33□□□□□ -0.28
CAPN1-204ENST00000526468 NECTIN1Q15223 517 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 HFE2Q6ZVN8 426 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 ALYREFQ86V81 257 aaKnown RBP13.33□□□□□ -0.28
CAPN1-204ENST00000526468 PLA2G4DQ86XP0 818 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 RNF135Q8IUD6 432 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 CKAP2LQ8IYA6 745 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 SMRP1Q8NCR6 262 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 SPPL3Q8TCT6 385 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 ERVK-5Q9HDB9 667 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 ZNF302Q9NR11 478 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 TLR9Q9NR96 1032 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 HCSTQ9UBK5 93 aa13.33□□□□□ -0.28
CAPN1-204ENST00000526468 PLXNA3P51805 1871 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 SMCO2A6NFE2 343 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 HBP1O60381 514 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 MGEA5O60502 916 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 PPFIA3O75145 1194 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 GLP2RO95838 553 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 KLRC1P26715 233 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 ADAM15Q13444 863 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 HERC4Q5GLZ8 1057 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-204ENST00000526468 JAKMIP3Q5VZ66 844 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 MIS18BP1Q6P0N0 1132 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 PDXDC2PQ6P474 469 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 TEX2Q8IWB9 1127 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 THNSL1Q8IYQ7 743 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 CRIPAKQ8N1N5 446 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 TMEM40Q8WWA1 233 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 MSLNLQ96KJ4 702 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 NEK1Q96PY6 1258 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 OSMRQ99650 979 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 GLT8D2Q9H1C3 349 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 AAASQ9NRG9 546 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 C1orf112Q9NSG2 853 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 BARHL2Q9NY43 387 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 BRPF3Q9ULD4 1205 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 NOC2LQ9Y3T9 749 aaKnown RBP13.32□□□□□ -0.28
CAPN1-204ENST00000526468 USP15Q9Y4E8 981 aaPredicted RBP13.32□□□□□ -0.28
CAPN1-204ENST00000526468 PCDHB7Q9Y5E2 793 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 PCDHB12Q9Y5F1 795 aa13.32□□□□□ -0.28
CAPN1-204ENST00000526468 FAM86B1E9PN63 330 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 MEIS1O00470 390 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 FAM86B2P0C5J1 330 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 FGD1P98174 961 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 SETQ01105 290 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-204ENST00000526468 NHLH1Q02575 133 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 FUT2Q10981 343 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 COASYQ13057 564 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 KIZQ2M2Z5 673 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 ODR4Q5SWX8 454 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 NIPA1Q7RTP0 329 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 TRMT1LQ7Z2T5 733 aaKnown RBP13.31□□□□□ -0.28
CAPN1-204ENST00000526468 NME8Q8N427 588 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 MICAL1Q8TDZ2 1067 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 FBXL18Q96ME1 805 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 ADAM2Q99965 735 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 UPF2Q9HAU5 1272 aaKnown RBP13.31□□□□□ -0.28
CAPN1-204ENST00000526468 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-204ENST00000526468 CLEC1BQ9P126 229 aa13.31□□□□□ -0.28
CAPN1-204ENST00000526468 V9GY48 417 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-204ENST00000526468 IGKV6D-21A0A0A0MT36 114 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 IPO5O00410 1097 aaKnown RBP13.3□□□□□ -0.28
CAPN1-204ENST00000526468 EIF5BO60841 1220 aaKnown RBP13.3□□□□□ -0.28
CAPN1-204ENST00000526468 ATG7O95352 703 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 C22orf31O95567 290 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 EYA4O95677 639 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 VTNP04004 478 aa13.3□□□□□ -0.28
CAPN1-204ENST00000526468 SRGAP2BP0DMP2 458 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms