RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 NT5C1B-RDH14C9J2C7 533 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 ADAMTS3O15072 1205 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 FGF18O76093 207 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 EYA4O95677 639 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 CCNE2O96020 404 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 PDGFBP01127 241 aaPredicted RBP7.5□□□□□ -1.21
CD44-221ENST00000526000 WEE2P0C1S8 567 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 FGFR4P22455 802 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 TECP42680 631 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 SARSP49591 514 aaKnown RBP7.5□□□□□ -1.21
CD44-221ENST00000526000 VCPP55072 806 aaKnown RBP7.5□□□□□ -1.21
CD44-221ENST00000526000 LONRF3Q496Y0 759 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 CREB3L3Q68CJ9 461 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 PDXDC2PQ6P474 469 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 SYNE3Q6ZMZ3 975 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 TMTC3Q6ZXV5 915 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 PLA2G4DQ86XP0 818 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 SUGP1Q8IWZ8 645 aaKnown RBP7.5□□□□□ -1.21
CD44-221ENST00000526000 CRIPAKQ8N1N5 446 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 TMTC2Q8N394 836 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 COLGALT1Q8NBJ5 622 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 P2RX5Q93086 422 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 CCDC136Q96JN2 1154 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 MAP3K14Q99558 947 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 OSMRQ99650 979 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 FTHL17Q9BXU8 183 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 ANO3Q9BYT9 981 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 LSG1Q9H089 658 aaKnown RBP7.5□□□□□ -1.21
CD44-221ENST00000526000 ATP6V0A4Q9HBG4 840 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 ERVK-5Q9HDB9 667 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 TSHZ2Q9NRE2 1034 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 BRPF3Q9ULD4 1205 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 SIP14410 1827 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 IGSF9BQ9UPX0 1349 aa7.5□□□□□ -1.21
CD44-221ENST00000526000 SMIM35A0A1B0GVV1 85 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 HIDE1A8MVS5 230 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 LOC730098B7Z3J9 87 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 H0Y858 1186 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 MAFGO15525 162 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 HBP1O60381 514 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 CSDE1O75534 798 aaKnown RBP7.49□□□□□ -1.21
CD44-221ENST00000526000 ATP4AP20648 1035 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 SMARCA1P28370 1054 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 AVPR2P30518 371 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 TCF15Q12870 199 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 DUSP6Q16828 381 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 CEP55Q53EZ4 464 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 NAALADL2Q58DX5 795 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 ABHD15Q6UXT9 468 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 LRRC55Q6ZSA7 311 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 SLC24A5Q71RS6 500 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 PLPPR4Q7Z2D5 763 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 TMC7Q7Z402 723 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 CCDC60Q8IWA6 550 aaPredicted RBP7.49□□□□□ -1.21
CD44-221ENST00000526000 NME8Q8N427 588 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 FBXL6Q8N531 539 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 C12orf76Q8N812 135 aaPredicted RBP7.49□□□□□ -1.21
CD44-221ENST00000526000 SMRP1Q8NCR6 262 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 ATOH1Q92858 354 aaPredicted RBP7.49□□□□□ -1.21
CD44-221ENST00000526000 TMEM87BQ96K49 555 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 PHF7Q9BWX1 381 aaPredicted RBP7.49□□□□□ -1.21
CD44-221ENST00000526000 SMOC2Q9H3U7 446 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 ANO2Q9NQ90 1003 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 ENTPD7Q9NQZ7 604 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 ZNF302Q9NR11 478 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 TLR9Q9NR96 1032 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 TRANK1O15050 2925 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 PIEZO1Q92508 2521 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 KAT6AQ92794 2004 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 TECTAO75443 2155 aa7.49□□□□□ -1.21
CD44-221ENST00000526000 XIRP2A4UGR9 3374 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 C9IYK1 514 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 FAM86B1E9PN63 330 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 MEIS1O00470 390 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 GPR182O15218 404 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 ATG7O95352 703 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 FAM86B2P0C5J1 330 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 CALM1P0DP23 149 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 CALM2P0DP24 149 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 CALM3P0DP25 149 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 MYBP10242 640 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 CPA1P15085 419 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 ADD1P35611 737 aaKnown RBP7.48□□□□□ -1.21
CD44-221ENST00000526000 CLCN3P51790 818 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 ADCY7P51828 1080 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 TTC3P53804 2025 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 NLRP11P59045 1033 aaKnown RBP7.48□□□□□ -1.21
CD44-221ENST00000526000 COASYQ13057 564 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 RTN1Q16799 776 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 FAM160B1Q5W0V3 765 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 ANKRD54Q6NXT1 300 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 SYCE2Q6PIF2 218 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 FAM228AQ86W67 206 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 LRRC71Q8N4P6 559 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 FEZF2Q8TBJ5 459 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 ATP8B4Q8TF62 1192 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 AUTS2Q8WXX7 1259 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 TNPO1Q92973 898 aaKnown RBP7.48□□□□□ -1.21
CD44-221ENST00000526000 GJA10Q969M2 543 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 NEK1Q96PY6 1258 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms