RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 KIF28PB7ZC32 967 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 TBX3O15119 743 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 C22orf31O95567 290 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 OATP04181 439 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 GHRP10912 638 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 MRPS6P82932 125 aaKnown RBP13.36□□□□□ -0.27
CDC27-202ENST00000525495 SPIRE1Q08AE8 756 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 PPP2R5CQ13362 524 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 ZNF484Q5JVG2 852 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.36□□□□□ -0.272e-9■■■■□ 21.4
CDC27-202ENST00000525495 RSPH3Q86UC2 560 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 RDM1Q8NG50 284 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 PHOSPHO2Q8TCD6 241 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 NAP1L4Q99733 375 aaKnown RBP13.36□□□□□ -0.27
CDC27-202ENST00000525495 NKX2-4Q9H2Z4 354 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 ZNF576Q9H609 170 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 TMEM265A0A087WTH1 108 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 TMEM150BA6NC51 233 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 SPDYE4A6NLX3 237 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 STBD1O95210 358 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 KCNJ6P48051 423 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 IKBKEQ14164 716 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 LPIN1Q14693 890 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 SAFBQ15424 915 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDC27-202ENST00000525495 RAB30Q15771 203 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 FBXO47Q5MNV8 452 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 HERC6Q8IVU3 1022 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 KIAA0319LQ8IZA0 1049 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 BANK1Q8NDB2 785 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 IL27Q8NEV9 243 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 IFIH1Q9BYX4 1025 aaKnown RBP13.36□□□□□ -0.27
CDC27-202ENST00000525495 FOXP1Q9H334 677 aaPredicted RBP13.36□□□□□ -0.27
CDC27-202ENST00000525495 MSRAQ9UJ68 235 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 PCDHA11Q9Y5I1 949 aa13.36□□□□□ -0.27
CDC27-202ENST00000525495 ARHGEF15O94989 841 aa13.35□□□□□ -0.27
CDC27-202ENST00000525495 ATP2B1P20020 1258 aa13.35□□□□□ -0.27
CDC27-202ENST00000525495 MCM2P49736 904 aa13.35□□□□□ -0.27
CDC27-202ENST00000525495 GRIN2CQ14957 1233 aa13.35□□□□□ -0.27
CDC27-202ENST00000525495 IER5Q5VY09 327 aa13.35□□□□□ -0.27
CDC27-202ENST00000525495 SEPT8Q92599 483 aa13.35□□□□□ -0.27
CDC27-202ENST00000525495 FAM167AQ96KS9 214 aa13.35□□□□□ -0.27
CDC27-202ENST00000525495 CDX2Q99626 313 aaPredicted RBP13.35□□□□□ -0.27
CDC27-202ENST00000525495 SH2D3AQ9BRG2 576 aa13.35□□□□□ -0.27
CDC27-202ENST00000525495 AGO3Q9H9G7 860 aaKnown RBP13.35□□□□□ -0.27
CDC27-202ENST00000525495 WRAP73Q9P2S5 460 aaPredicted RBP13.35□□□□□ -0.27
CDC27-202ENST00000525495 TRPV2Q9Y5S1 764 aa13.35□□□□□ -0.27
CDC27-202ENST00000525495 MYO9BQ13459 2157 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.34□□□□□ -0.27
CDC27-202ENST00000525495 NEMFO60524 1076 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 CA3P07451 260 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 CLCN3P51790 818 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 TARBP2Q15633 366 aaKnown RBP13.34□□□□□ -0.27
CDC27-202ENST00000525495 CALCRLQ16602 461 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 NOSTRINQ8IVI9 506 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 LRRC71Q8N4P6 559 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 LINC01465Q8N7H1 131 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 MYLIPQ8WY64 445 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 MTMR9Q96QG7 549 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 CEP89Q96ST8 783 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 PPP1R16BQ96T49 567 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 CELF4Q9BZC1 486 aaKnown RBP13.34□□□□□ -0.27
CDC27-202ENST00000525495 TMEM60Q9H2L4 133 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 CDHR5Q9HBB8 845 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 NRBP2Q9NSY0 501 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 SEPT9Q9UHD8 586 aaPredicted RBP13.34□□□□□ -0.27
CDC27-202ENST00000525495 CEP131Q9UPN4 1083 aa13.34□□□□□ -0.27
CDC27-202ENST00000525495 LCHNA4D1U4 455 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 MARCH6O60337 910 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 EFCAB14O75071 495 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 VTNP04004 478 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 RPLP2P05387 115 aaKnown RBP13.33□□□□□ -0.28
CDC27-202ENST00000525495 GJB2P29033 226 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 CD52P31358 61 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 MCM7P33993 719 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 PSMC5P62195 406 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 XKR3Q5GH77 459 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 NCAPH2Q6IBW4 605 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 FAM117BQ6P1L5 589 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 TSHZ1Q6ZSZ6 1077 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 ANO5Q75V66 913 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 SLFN12Q8IYM2 578 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 NME8Q8N427 588 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 METTL13Q8N6R0 699 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 TMEM40Q8WWA1 233 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 NIFKQ9BYG3 293 aaKnown RBP13.33□□□□□ -0.28
CDC27-202ENST00000525495 TTC12Q9H892 705 aaPredicted RBP13.33□□□□□ -0.28
CDC27-202ENST00000525495 SLC28A3Q9HAS3 691 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 RGL1Q9NZL6 768 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 GINS2Q9Y248 185 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 STXBP5LQ9Y2K9 1186 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 ARID2Q68CP9 1835 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 KDM3AQ9Y4C1 1321 aa13.33□□□□□ -0.28
CDC27-202ENST00000525495 PRUNE2Q8WUY3 3088 aa13.32□□□□□ -0.28
CDC27-202ENST00000525495 M0QZ92 97 aa13.32□□□□□ -0.28
CDC27-202ENST00000525495 TLL1O43897 1013 aa13.32□□□□□ -0.28
CDC27-202ENST00000525495 GJB5O95377 273 aa13.32□□□□□ -0.28
CDC27-202ENST00000525495 BAG4O95429 457 aaKnown RBP13.32□□□□□ -0.28
CDC27-202ENST00000525495 P4HBP07237 508 aaKnown RBP13.32□□□□□ -0.28
CDC27-202ENST00000525495 U2AF2P26368 475 aaKnown RBP eCLIP13.32□□□□□ -0.284e-9■■■■■ 27.7
CDC27-202ENST00000525495 TXKP42681 527 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms