RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 RNF180Q86T96 592 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 DPP9Q86TI2 863 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 CERS3Q8IU89 383 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 ERC1Q8IUD2 1116 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 ZFPM1Q8IX07 1006 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 GALNT12Q8IXK2 581 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 AGGF1Q8N302 714 aaeCLIP5.72□□□□□ -1.49
CD44-218ENST00000525469 GPATCH11Q8N954 259 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 KIAA1524Q8TCG1 905 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 ITFG2Q969R8 447 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 FAM129BQ96TA1 746 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 RUSC1Q9BVN2 902 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 SRRTQ9BXP5 876 aaKnown RBP5.72□□□□□ -1.49
CD44-218ENST00000525469 PORCNQ9H237 461 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 CXorf56Q9H5V9 222 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 LIN7BQ9HAP6 207 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 TXNRD2Q9NNW7 524 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 FLRT1Q9NZU1 646 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.72□□□□□ -1.49
CD44-218ENST00000525469 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.72□□□□□ -1.49
CD44-218ENST00000525469 PTPRZ1P23471 2315 aaPredicted RBP5.72□□□□□ -1.49
CD44-218ENST00000525469 BRWD1Q9NSI6 2320 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 MROH5Q6ZUA9 1318 aa5.72□□□□□ -1.49
CD44-218ENST00000525469 ZNF318Q5VUA4 2279 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 LOC102724159A0A0B4J2E5 919 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 C19orf81C9J6K1 198 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 H0YHG0 523 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 MYO1CO00159 1063 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 SGSM2O43147 1006 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 SEPT4O43236 478 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 GAS2O43903 313 aaKnown RBP5.71□□□□□ -1.5
CD44-218ENST00000525469 PEX10O60683 326 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 IPO7O95373 1038 aaKnown RBP5.71□□□□□ -1.5
CD44-218ENST00000525469 LDHBP07195 334 aaKnown RBP5.71□□□□□ -1.5
CD44-218ENST00000525469 IFIT1P09914 478 aaKnown RBP5.71□□□□□ -1.5
CD44-218ENST00000525469 CYBAP13498 195 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 SLC5A1P13866 664 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 HOXA7P31268 230 aaPredicted RBP5.71□□□□□ -1.5
CD44-218ENST00000525469 HNRNPH2P55795 449 aaKnown RBP5.71□□□□□ -1.5
CD44-218ENST00000525469 NLRP12P59046 1061 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 GNAI1P63096 354 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 NCBP1Q09161 790 aaKnown RBP5.71□□□□□ -1.5
CD44-218ENST00000525469 PICALMQ13492 652 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 PWP2Q15269 919 aaKnown RBP5.71□□□□□ -1.5
CD44-218ENST00000525469 METTL24Q5JXM2 366 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 EPHA10Q5JZY3 1008 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 MFSD5Q6N075 450 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 MMS22LQ6ZRQ5 1243 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 ZNF365Q70YC5 407 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 EFCAB13Q8IY85 973 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 TRMT2AQ8IZ69 625 aaKnown RBP5.71□□□□□ -1.5
CD44-218ENST00000525469 Q8N3U1 123 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 MSL3Q8N5Y2 521 aaKnown RBP5.71□□□□□ -1.5
CD44-218ENST00000525469 FBXO18Q8NFZ0 1043 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 LINS1Q8NG48 757 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 EXOC4Q96A65 974 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 KLHDC7BQ96G42 594 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 MFSD14AQ96MC6 490 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 TOX2Q96NM4 488 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 A1CFQ9NQ94 594 aaKnown RBP5.71□□□□□ -1.5
CD44-218ENST00000525469 SLC5A4Q9NY91 659 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 RBPJLQ9UBG7 517 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 GNEQ9Y223 722 aaKnown RBP5.71□□□□□ -1.5
CD44-218ENST00000525469 HIF3AQ9Y2N7 669 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 RAXQ9Y2V3 346 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 ATP6V1DQ9Y5K8 247 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 CACNA1BQ00975 2339 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 CACNA1GO43497 2377 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 MROH7Q68CQ1 1323 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 ZNF521Q96K83 1311 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 A0A0G2JMZ2 1700 aa5.71□□□□□ -1.5
CD44-218ENST00000525469 KLHL33A6NCF5 533 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 DDTLA6NHG4 134 aaPredicted RBP5.7□□□□□ -1.5
CD44-218ENST00000525469 SOWAHDA6NJG2 315 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 A6NNZ2 444 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 RPS6KA5O75582 802 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 WISP1O95388 367 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 CPP00450 1065 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 FGBP02675 491 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 TUBBP07437 444 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 ACRP10323 421 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 RARBP10826 455 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 CSF2RAP15509 400 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 CASP7P55210 303 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 FOXO4P98177 505 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 SLFN5Q08AF3 891 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 FAAP100Q0VG06 881 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 HDAC1Q13547 482 aaPredicted RBP5.7□□□□□ -1.5
CD44-218ENST00000525469 TUBB8Q3ZCM7 444 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 SRLQ86TD4 932 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 CCDC146Q8IYE0 955 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 TRPV1Q8NER1 839 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 UBASH3BQ8TF42 649 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 NUP133Q8WUM0 1156 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 DNAAF4Q8WXU2 420 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 ERCC4Q92889 916 aaPredicted RBP5.7□□□□□ -1.5
CD44-218ENST00000525469 HHIPQ96QV1 700 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 PRRX2Q99811 253 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 IDI2Q9BXS1 227 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 USP26Q9BXU7 913 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms