RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CYP26B1Q9NR63 512 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 ZHX1Q9UKY1 873 aaPredicted RBP5.08□□□□□ -1.6
CD44-213ENST00000525209 DENND2AQ9ULE3 1009 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 SMC3Q9UQE7 1217 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 KNSTRNQ9Y448 316 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 ATP6V0A2Q9Y487 856 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 TRAF6Q9Y4K3 522 aa5.08□□□□□ -1.6
CD44-213ENST00000525209 ASXL2Q76L83 1435 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 CAPN8A6NHC0 703 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 GOLGA8AA7E2F4 631 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 GOLGA8BA8MQT2 603 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 TMEM110-MUSTN1A8MSY1 372 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 NFKBIEO00221 500 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 IPO5O00410 1097 aaKnown RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 AQP7O14520 342 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 MMP20O60882 483 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 FGF18O76093 207 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 URI1O94763 535 aaPredicted RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 ADAMTS2O95450 1211 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 EOMESO95936 686 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 CCDC159P0C7I6 412 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 SELPP16109 830 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 TATP17735 454 aaPredicted RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 ALOX12P18054 663 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 ATP4AP20648 1035 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 NOP2P46087 812 aaKnown RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 KCNJ6P48051 423 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 GSK3AP49840 483 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 MRPS35P82673 323 aaKnown RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 ZNF543Q08ER8 600 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 FOXO1Q12778 655 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 MAP4K2Q12851 820 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 PDE3AQ14432 1141 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 SLMAPQ14BN4 828 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 POLD3Q15054 466 aaPredicted RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 PLCL1Q15111 1095 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 ANO6Q4KMQ2 910 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 C4orf17Q53FE4 359 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 FBXO47Q5MNV8 452 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 TMEM201Q5SNT2 666 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 GALNT17Q6IS24 598 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 GGT6Q6P531 493 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 USP45Q70EL2 814 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 BTN2A1Q7KYR7 527 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 EPHX4Q8IUS5 362 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 GALNT15Q8N3T1 639 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 PRR18Q8N4B5 295 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 FAM13CQ8NE31 585 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 RSAD2Q8WXG1 361 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 RFFLQ8WZ73 363 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 ERCC4Q92889 916 aaPredicted RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 ZC3H10Q96K80 434 aaKnown RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 SPATA17Q96L03 361 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 FGD4Q96M96 766 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 TIGD1Q96MW7 591 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 JAKMIP1Q96N16 626 aaKnown RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 TSGA13Q96PP4 275 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 LRFN3Q9BTN0 628 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 GRIP2Q9C0E4 1043 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 DEF6Q9H4E7 631 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 DCP1AQ9NPI6 582 aaPredicted RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 PRDM5Q9NQX1 630 aaPredicted RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 CCM2LQ9NUG4 571 aaPredicted RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 PIH1D1Q9NWS0 290 aaKnown RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 ORC3Q9UBD5 711 aaPredicted RBP5.07□□□□□ -1.6
CD44-213ENST00000525209 ADAMTS8Q9UP79 889 aa5.07□□□□□ -1.6
CD44-213ENST00000525209 RSF1Q96T23 1441 aaPredicted RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 PI4K2BG5E9Z4 385 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 NOP56O00567 594 aaKnown RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 AOC2O75106 756 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 SOAT2O75908 522 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 ECEL1O95672 775 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 STARD3NLO95772 234 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 MT-ND3P03897 115 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 TP53P04637 393 aaPredicted RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 SLURP2P0DP57 97 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 PLCG1P19174 1290 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 PDCP20941 246 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 MC4RP32245 332 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 GPC1P35052 558 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 CD86P42081 329 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 PHKA2P46019 1235 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 YARSP54577 528 aaKnown RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 TLE2Q04725 743 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 MOGSQ13724 837 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 LRP8Q14114 963 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 KRT32Q14532 448 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 ASIC2Q16515 512 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 FAM110CQ1W6H9 321 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 ZNF423Q2M1K9 1284 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 ARL13BQ3SXY8 428 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 ZACNQ401N2 412 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 GNASQ5JWF2 1037 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 METTL24Q5JXM2 366 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 ZMYM1Q5SVZ6 1142 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 COL13A1Q5TAT6 717 aaPredicted RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 KLHL10Q6JEL2 608 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 RPUSD3Q6P087 351 aaKnown RBP5.06□□□□□ -1.6
CD44-213ENST00000525209 LYPD4Q6UWN0 246 aa5.06□□□□□ -1.6
CD44-213ENST00000525209 ADAMTSL4Q6UY14 1074 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms