RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TMEM119Q4V9L6 283 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 ARSHQ5FYA8 562 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 PALB2Q86YC2 1186 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 LRRC45Q96CN5 670 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 KCTD10Q9H3F6 313 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 SLC24A3Q9HC58 644 aa14.35□□□□□ -0.11
CAPN1-202ENST00000524773 DDX3XO00571 662 aaKnown RBP eCLIP14.34□□□□□ -0.113e-11■■■■■ 33.2
CAPN1-202ENST00000524773 MED24O75448 989 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 AKAP3O75969 853 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 DRD4P21917 467 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 ADCY1Q08828 1119 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 DCAF12L1Q5VU92 463 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 OTUD6AQ7L8S5 288 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 NBPF5PQ86XG9 351 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-202ENST00000524773 TEX11Q8IYF3 940 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 TATDN2Q93075 761 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 ELAC2Q9BQ52 826 aaKnown RBP14.34□□□□□ -0.11
CAPN1-202ENST00000524773 AZI2Q9H6S1 392 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 TAS2R14Q9NYV8 317 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 AIPL1Q9NZN9 384 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 PCDHA2Q9Y5H9 948 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 HSPA1LP34931 641 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 NEDD9Q14511 834 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 EXOC3L4Q17RC7 722 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 PREPLQ4J6C6 727 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-202ENST00000524773 COBLL1Q53SF7 1204 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 GKAP1Q5VSY0 366 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-202ENST00000524773 AMIGO3Q86WK7 504 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 SPATS2Q86XZ4 545 aaKnown RBP14.34□□□□□ -0.11
CAPN1-202ENST00000524773 ARFGAP2Q8N6H7 521 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 LINC00116Q8NCU8 138 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 IQCDQ96DY2 449 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 PSMD1Q99460 953 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 A6NNZ2 444 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 MYCNP04198 464 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-202ENST00000524773 CYP11B2P19099 503 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 HOXD13P35453 343 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 TUBB8Q3ZCM7 444 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 CPNE8Q86YQ8 564 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 ATP8B4Q8TF62 1192 aa14.34□□□□□ -0.11
CAPN1-202ENST00000524773 THOC1Q96FV9 657 aaKnown RBP14.34□□□□□ -0.11
CAPN1-202ENST00000524773 PRMT1Q99873 361 aaKnown RBP14.34□□□□□ -0.11
CAPN1-202ENST00000524773 DBR1Q9UK59 544 aaKnown RBP14.34□□□□□ -0.11
CAPN1-202ENST00000524773 MYH7BA7E2Y1 1941 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 USP17L10C9JJH3 530 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 LRRN2O75325 713 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 MMEP08473 750 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 ZBTB48P10074 688 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-202ENST00000524773 FGFR4P22455 802 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 NT5C2P49902 561 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 GALCP54803 685 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 CUL1Q13616 776 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 EMC10Q5UCC4 262 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 SFR1Q86XK3 245 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 LRRC34Q8IZ02 419 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 STAMBPL1Q96FJ0 436 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 SGSM3Q96HU1 749 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 PAGR1Q9BTK6 254 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 BMP2KQ9NSY1 1161 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-202ENST00000524773 DNAJC17Q9NVM6 304 aaKnown RBP14.33□□□□□ -0.12
CAPN1-202ENST00000524773 KIAA1551Q9HCM1 1747 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 CETN3O15182 167 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 UPP2O95045 317 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 VIMP08670 466 aaKnown RBP14.33□□□□□ -0.12
CAPN1-202ENST00000524773 KRT13P13646 458 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 AKR1B1P15121 316 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 MARCKSL1P49006 195 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 PSEN1P49768 467 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 FAM182BQ5T319 152 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 DPY19L2P1Q6NXN4 242 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 RUFY4Q6ZNE9 571 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 NT5DC3Q86UY8 548 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 EPS8L3Q8TE67 593 aaKnown RBP14.33□□□□□ -0.12
CAPN1-202ENST00000524773 CCT6BQ92526 530 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 ARHGEF26Q96DR7 871 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 XPO6Q96QU8 1125 aaKnown RBP14.33□□□□□ -0.12
CAPN1-202ENST00000524773 ARMCX3Q9UH62 379 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-202ENST00000524773 ZNF652Q9Y2D9 606 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 SNED1Q8TER0 1413 aa14.33□□□□□ -0.12
CAPN1-202ENST00000524773 A8MUI8 341 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 CREB1P16220 341 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 MSL1Q68DK7 614 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 LRIG3Q6UXM1 1119 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 DPP8Q6V1X1 898 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-202ENST00000524773 CCDC25Q86WR0 208 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 KIF2BQ8N4N8 673 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 LNX1Q8TBB1 728 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-202ENST00000524773 FBXO25Q8TCJ0 367 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 ACTRT1Q8TDG2 376 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 PRCCQ92733 491 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-202ENST00000524773 RNF25Q96BH1 459 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-202ENST00000524773 C18orf8Q96DM3 657 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 FMO2Q99518 471 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 RAB34Q9BZG1 259 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 ABCF3Q9NUQ8 709 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 GCNT4Q9P109 453 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 PTPN22Q9Y2R2 807 aa14.32□□□□□ -0.12
CAPN1-202ENST00000524773 UTP11Q9Y3A2 253 aaKnown RBP14.32□□□□□ -0.12
CAPN1-202ENST00000524773 ATXN2Q99700 1313 aaKnown RBP14.32□□□□□ -0.12
CAPN1-202ENST00000524773 SLC29A2Q14542 456 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms