RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 CCDC73Q6ZRK6 1079 aa6.76□□□□□ -1.33
EFCAB13-213ENST00000523978 UBE2Q1Q7Z7E8 422 aa6.76□□□□□ -1.33
EFCAB13-213ENST00000523978 TTC9BQ8N6N2 239 aa6.76□□□□□ -1.33
EFCAB13-213ENST00000523978 C8orf49Q96NF6 230 aa6.76□□□□□ -1.33
EFCAB13-213ENST00000523978 SAMD11Q96NU1 681 aa6.76□□□□□ -1.33
EFCAB13-213ENST00000523978 SSBP3Q9BWW4 388 aaPredicted RBP6.76□□□□□ -1.33
EFCAB13-213ENST00000523978 ZNF700Q9H0M5 742 aa6.76□□□□□ -1.33
EFCAB13-213ENST00000523978 CDIP1Q9H305 208 aa6.76□□□□□ -1.33
EFCAB13-213ENST00000523978 TMPRSS5Q9H3S3 457 aa6.76□□□□□ -1.33
EFCAB13-213ENST00000523978 MYOTQ9UBF9 498 aa6.76□□□□□ -1.33
EFCAB13-213ENST00000523978 ZNF536O15090 1300 aa6.76□□□□□ -1.33
EFCAB13-213ENST00000523978 A0A1W2PQU0 124 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 C9orf118A6NHY6 69 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 IPO8O15397 1037 aaKnown RBP6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 B4GALT3O60512 393 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 LRG1P02750 347 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 RBP3P10745 1247 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 MLLT6P55198 1093 aaPredicted RBP6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 MAP4K2Q12851 820 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 PPP2R5AQ15172 486 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 CCDC93Q567U6 631 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 PLEKHG4Q58EX7 1191 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 SYCP2LQ5T4T6 812 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 LCA5Q86VQ0 697 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 MCF2L2Q86YR7 1114 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 CHCHD4Q8N4Q1 142 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 HNRNPLLQ8WVV9 542 aaKnown RBP6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 ERP27Q96DN0 273 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 CLIC6Q96NY7 704 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 EPN3Q9H201 632 aa6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 PPARGC1AQ9UBK2 798 aaKnown RBP6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 THRAP3Q9Y2W1 955 aaKnown RBP6.75□□□□□ -1.33
EFCAB13-213ENST00000523978 AGRPO00253 132 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 MSCO60682 206 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 RNASEH2AO75792 299 aaKnown RBP6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 CYP1A1P04798 512 aaPredicted RBP6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 NEFHP12036 1026 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 KCNA2P16389 499 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 ZNF20P17024 532 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 DNAJA1P31689 397 aaKnown RBP6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 IL13P35225 146 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 EIF5P55010 431 aaKnown RBP6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 WASHC5Q12768 1159 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 SIM2Q14190 667 aaPredicted RBP6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 HLTFQ14527 1009 aaKnown RBP eCLIP6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 LONRF1Q17RB8 773 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 CPZQ66K79 652 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 TMC5Q6UXY8 1006 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 LIMS2Q7Z4I7 341 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 CELF2-AS1Q8N7Q2 184 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 ZCCHC14Q8WYQ9 949 aaKnown RBP6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 KCTD13Q8WZ19 329 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 MBD6Q96DN6 1003 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 CDHR1Q96JP9 859 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 L2HGDHQ9H9P8 463 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 ARNT2Q9HBZ2 717 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 ST7Q9NRC1 585 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 RBPJLQ9UBG7 517 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 CROTQ9UKG9 612 aa6.74□□□□□ -1.33
EFCAB13-213ENST00000523978 ZCCHC6Q5VYS8 1495 aaKnown RBP6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 DYTNA2CJ06 578 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 MYL1P05976 194 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 TNFRSF1AP19438 455 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 ARID5AQ03989 594 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 NDUFAF2Q8N183 169 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 KIAA1958Q8N8K9 716 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 PHOSPHO1Q8TCT1 267 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 TMEM209Q96SK2 561 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 JAM3Q9BX67 310 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 SMOC1Q9H4F8 434 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 SUDS3Q9H7L9 328 aaPredicted RBP6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 AS3MTQ9HBK9 375 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 ASH2LQ9UBL3 628 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 ST6GALNAC2Q9UJ37 374 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 RAD54L2Q9Y4B4 1467 aa6.73□□□□□ -1.33
EFCAB13-213ENST00000523978 IPO5O00410 1097 aaKnown RBP6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 PES1O00541 588 aaKnown RBP6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 MATN3O15232 486 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 LAMTOR5O43504 91 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 DLX3O60479 287 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 RRM1P23921 792 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 HMGN5P82970 282 aaKnown RBP6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 CCDC70Q6NSX1 233 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 PPP4R4Q6NUP7 873 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 PDXDC1Q6P996 788 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 GLB1LQ6UWU2 654 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 USP53Q70EK8 1073 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 WDR75Q8IWA0 830 aaKnown RBP6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 PIP4K2CQ8TBX8 421 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 PHF20Q9BVI0 1012 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 C1QTNF3Q9BXJ4 246 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 TMEM168Q9H0V1 697 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 SLKQ9H2G2 1235 aaPredicted RBP6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 GPR27Q9NS67 375 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 CLIC5Q9NZA1 410 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 PPP4R1LQ9P1A2 415 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 SLC45A1Q9Y2W3 748 aa6.72□□□□□ -1.33
EFCAB13-213ENST00000523978 SLC27A2O14975 620 aa6.71□□□□□ -1.34
EFCAB13-213ENST00000523978 KIF1CO43896 1103 aaKnown RBP6.71□□□□□ -1.34
EFCAB13-213ENST00000523978 COQ9O75208 318 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms