RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 NT5DC1Q5TFE4 455 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 DPP8Q6V1X1 898 aaPredicted RBP7.73□□□□□ -1.17
CPNE3-207ENST00000523588 FKBP9P1Q75LS8 142 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 CXXC5Q7LFL8 322 aaKnown RBP7.73□□□□□ -1.17
CPNE3-207ENST00000523588 AFAP1L2Q8N4X5 818 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 FOXB1Q99853 325 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 TMEM168Q9H0V1 697 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 OR10A5Q9H207 317 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 TMX1Q9H3N1 280 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 TOMM22Q9NS69 142 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 FTSJ1Q9UET6 329 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 OTOL1A6NHN0 477 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-207ENST00000523588 SASH1O94885 1247 aa7.72□□□□□ -1.17
CPNE3-207ENST00000523588 PRLP01236 227 aa7.72□□□□□ -1.17
CPNE3-207ENST00000523588 POU3F3P20264 500 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-207ENST00000523588 IL2P60568 153 aa7.72□□□□□ -1.17
CPNE3-207ENST00000523588 ZCCHC4Q9H5U6 513 aa7.72□□□□□ -1.17
CPNE3-207ENST00000523588 MROH6A6NGR9 719 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 NEMP1O14524 444 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 CYP1A1P04798 512 aaPredicted RBP7.71□□□□□ -1.18
CPNE3-207ENST00000523588 ID4P47928 161 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 CD83Q01151 205 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 OCRLQ01968 901 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 STRN3Q13033 797 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 LRRC32Q14392 662 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 FBLN7Q53RD9 439 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 Q6ZUG5 572 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 NME9Q86XW9 330 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 E2F7Q96AV8 911 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 MAML3Q96JK9 1138 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 LCORQ96JN0 433 aaPredicted RBP7.71□□□□□ -1.18
CPNE3-207ENST00000523588 EMC7Q9NPA0 242 aa7.71□□□□□ -1.18
CPNE3-207ENST00000523588 UBA6A0AVT1 1052 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-207ENST00000523588 EYA4O95677 639 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 INHBBP09529 407 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 GJA9P57773 515 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 PHC1P78364 1004 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 SLC6A3Q01959 620 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 NFATC3Q12968 1075 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 WDR72Q3MJ13 1102 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 PASD1Q8IV76 773 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 KLHL36Q8N4N3 616 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 CALML6Q8TD86 181 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 RTF1Q92541 710 aaKnown RBP7.7□□□□□ -1.18
CPNE3-207ENST00000523588 USP7Q93009 1102 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 AJUBAQ96IF1 538 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 FAM126AQ9BYI3 521 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-207ENST00000523588 KATNBL1Q9H079 304 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 SPC25Q9HBM1 224 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 ADAM29Q9UKF5 820 aa7.7□□□□□ -1.18
CPNE3-207ENST00000523588 ZEB2O60315 1214 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 DNAJC6O75061 913 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 MAFO75444 373 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-207ENST00000523588 POLD1P28340 1107 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 RGS3P49796 1198 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 ADCY1Q08828 1119 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 TOP3AQ13472 1001 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-207ENST00000523588 TERF2Q15554 542 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 TTC38Q5R3I4 469 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 GPR158Q5T848 1215 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 TTLL10Q6ZVT0 673 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 FILIP1Q7Z7B0 1213 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 ZZZ3Q8IYH5 903 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 ZDHHC14Q8IZN3 488 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 SCYL1Q96KG9 808 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 TTC1Q99614 292 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 ZDHHC5Q9C0B5 715 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 IFT22Q9H7X7 185 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 DUSP10Q9Y6W6 482 aa7.69□□□□□ -1.18
CPNE3-207ENST00000523588 HOXA5P20719 270 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 CD40P25942 277 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 APEX1P27695 318 aaKnown RBP7.68□□□□□ -1.18
CPNE3-207ENST00000523588 CSF2RBP32927 897 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 ADCY8P40145 1251 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 ROM1Q03395 351 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 KIAA2012Q0VF49 1180 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 MOGSQ13724 837 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 MYBPC3Q14896 1274 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 ATP13A4Q4VNC1 1196 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 CT47A1Q5JQC4 288 aaPredicted RBP7.68□□□□□ -1.18
CPNE3-207ENST00000523588 SLFN12LQ6IEE8 588 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 ZNF610Q8N9Z0 462 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 TUBGCP5Q96RT8 1024 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 SEMA4AQ9H3S1 761 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 MS4A5Q9H3V2 200 aa7.68□□□□□ -1.18
CPNE3-207ENST00000523588 BARX1Q9HBU1 254 aaPredicted RBP7.68□□□□□ -1.18
CPNE3-207ENST00000523588 B4GALT3O60512 393 aa7.67□□□□□ -1.18
CPNE3-207ENST00000523588 CNGA1P29973 690 aa7.67□□□□□ -1.18
CPNE3-207ENST00000523588 EIF4HQ15056 248 aaKnown RBP7.67□□□□□ -1.18
CPNE3-207ENST00000523588 TMEM200BQ69YZ2 307 aa7.67□□□□□ -1.18
CPNE3-207ENST00000523588 KANSL1Q7Z3B3 1105 aa7.67□□□□□ -1.18
CPNE3-207ENST00000523588 FRMD5Q7Z6J6 570 aa7.67□□□□□ -1.18
CPNE3-207ENST00000523588 C11orf74Q86VG3 221 aa7.67□□□□□ -1.18
CPNE3-207ENST00000523588 PHYKPLQ8IUZ5 450 aa7.67□□□□□ -1.18
CPNE3-207ENST00000523588 REXO1L1PQ8IX06 675 aa7.67□□□□□ -1.18
CPNE3-207ENST00000523588 ZNF496Q96IT1 587 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-207ENST00000523588 USP40Q9NVE5 1235 aa7.67□□□□□ -1.18
CPNE3-207ENST00000523588 FBXO10Q9UK96 956 aa7.67□□□□□ -1.18
CPNE3-207ENST00000523588 A0A0G2JLL6 359 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-207ENST00000523588 LCHNA4D1U4 455 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms