RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 EMSYQ7Z589 1322 aa23.77■■□□□ 1.39
R3HCC1-208ENST00000522012 PPFIA4O75335 1185 aa23.76■■□□□ 1.39
R3HCC1-208ENST00000522012 MMP3P08254 477 aa23.76■■□□□ 1.39
R3HCC1-208ENST00000522012 PRKAR2AP13861 404 aaKnown RBP23.76■■□□□ 1.39
R3HCC1-208ENST00000522012 MARK3P27448 753 aa23.76■■□□□ 1.39
R3HCC1-208ENST00000522012 GIT2Q14161 759 aa23.76■■□□□ 1.39
R3HCC1-208ENST00000522012 KCNB1Q14721 858 aa23.76■■□□□ 1.39
R3HCC1-208ENST00000522012 DPCR1Q3MIW9 517 aa23.76■■□□□ 1.39
R3HCC1-208ENST00000522012 REEP2Q9BRK0 252 aa23.76■■□□□ 1.39
R3HCC1-208ENST00000522012 DNAJC25Q9H1X3 360 aa23.76■■□□□ 1.39
R3HCC1-208ENST00000522012 PANK4Q9NVE7 773 aa23.76■■□□□ 1.39
R3HCC1-208ENST00000522012 Q9Y3F1 56 aa23.76■■□□□ 1.39
R3HCC1-208ENST00000522012 LGALS2P05162 132 aa23.75■■□□□ 1.39
R3HCC1-208ENST00000522012 BMP6P22004 513 aa23.75■■□□□ 1.39
R3HCC1-208ENST00000522012 DGKDQ16760 1214 aa23.75■■□□□ 1.39
R3HCC1-208ENST00000522012 CCDC65Q8IXS2 484 aa23.75■■□□□ 1.39
R3HCC1-208ENST00000522012 ZHX3Q9H4I2 956 aa23.75■■□□□ 1.39
R3HCC1-208ENST00000522012 KCND2Q9NZV8 630 aa23.75■■□□□ 1.39
R3HCC1-208ENST00000522012 DOCK5Q9H7D0 1870 aa23.75■■□□□ 1.39
R3HCC1-208ENST00000522012 SEPT4O43236 478 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 USO1O60763 962 aaKnown RBP23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 RHOBTB3O94955 611 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 MTERF2Q49AM1 385 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 FAM167AQ96KS9 214 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 POLD4Q9HCU8 107 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 CYP26B1Q9NR63 512 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 A6NJR5 290 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 DUSP11O75319 330 aaKnown RBP23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 TBCAO75347 108 aaKnown RBP23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 ZNF286BP0CG31 522 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 CCND3P30281 292 aaPredicted RBP23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 SLC26A2P50443 739 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 ZNF658Q5TYW1 1059 aaPredicted RBP23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 C11orf57Q6ZUT1 292 aaPredicted RBP23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 MAEAQ7L5Y9 396 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 SLAIN1Q8ND83 568 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 NIFKQ9BYG3 293 aaKnown RBP23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 ERAP1Q9NZ08 941 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 PTCH2Q9Y6C5 1203 aa23.74■■□□□ 1.39
R3HCC1-208ENST00000522012 GUCY2CP25092 1073 aa23.73■■□□□ 1.39
R3HCC1-208ENST00000522012 CPT1AP50416 773 aa23.73■■□□□ 1.39
R3HCC1-208ENST00000522012 COASYQ13057 564 aa23.73■■□□□ 1.39
R3HCC1-208ENST00000522012 PLCB4Q15147 1175 aa23.73■■□□□ 1.39
R3HCC1-208ENST00000522012 BRDTQ58F21 947 aaPredicted RBP23.73■■□□□ 1.39
R3HCC1-208ENST00000522012 MLKLQ8NB16 471 aa23.73■■□□□ 1.39
R3HCC1-208ENST00000522012 ATP8B4Q8TF62 1192 aa23.73■■□□□ 1.39
R3HCC1-208ENST00000522012 ABHD8Q96I13 439 aa23.73■■□□□ 1.39
R3HCC1-208ENST00000522012 HOXD8P13378 290 aaPredicted RBP23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 GRK4P32298 578 aa23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 IRX5P78411 483 aaPredicted RBP23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 HERC4Q5GLZ8 1057 aaPredicted RBP23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 SMYD4Q8IYR2 804 aaPredicted RBP23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 RNF214Q8ND24 703 aa23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 BBXQ8WY36 941 aaPredicted RBP23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 HPS3Q969F9 1004 aa23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 C16orf70Q9BSU1 422 aa23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 NAT10Q9H0A0 1025 aaKnown RBP23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 RBSNQ9H1K0 784 aa23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 ZNF215Q9UL58 517 aaPredicted RBP23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 TRPC6Q9Y210 931 aa23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 GDAQ9Y2T3 454 aa23.72■■□□□ 1.39
R3HCC1-208ENST00000522012 SFI1A8K8P3 1242 aa23.71■■□□□ 1.39
R3HCC1-208ENST00000522012 RSPH10B2B2RC85 870 aa23.71■■□□□ 1.39
R3HCC1-208ENST00000522012 FAM13AO94988 1023 aa23.71■■□□□ 1.39
R3HCC1-208ENST00000522012 RSPH10BP0C881 870 aa23.71■■□□□ 1.39
R3HCC1-208ENST00000522012 RARBP10826 455 aa23.71■■□□□ 1.39
R3HCC1-208ENST00000522012 BEX3Q00994 111 aa23.71■■□□□ 1.39
R3HCC1-208ENST00000522012 MAP3K21Q5TCX8 1036 aa23.71■■□□□ 1.39
R3HCC1-208ENST00000522012 DACH1Q9UI36 760 aa23.71■■□□□ 1.39
R3HCC1-208ENST00000522012 COL4A3BPQ9Y5P4 624 aa23.71■■□□□ 1.39
R3HCC1-208ENST00000522012 GOLGA6L3A6NEY3 463 aa23.7■■□□□ 1.38
R3HCC1-208ENST00000522012 HIP1RO75146 1068 aa23.7■■□□□ 1.38
R3HCC1-208ENST00000522012 INHAP05111 366 aa23.7■■□□□ 1.38
R3HCC1-208ENST00000522012 ZNF165P49910 485 aa23.7■■□□□ 1.38
R3HCC1-208ENST00000522012 FSCN1Q16658 493 aaKnown RBP23.7■■□□□ 1.38
R3HCC1-208ENST00000522012 RNPEPQ9H4A4 650 aa23.7■■□□□ 1.38
R3HCC1-208ENST00000522012 SLC39A2Q9NP94 309 aa23.7■■□□□ 1.38
R3HCC1-208ENST00000522012 TBC1D7Q9P0N9 293 aa23.7■■□□□ 1.38
R3HCC1-208ENST00000522012 ODF2LQ9ULJ1 636 aa23.7■■□□□ 1.38
R3HCC1-208ENST00000522012 FRMD3A2A2Y4 597 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 H3BRB1 525 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 DGAT1O75907 488 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 CAVIN2O95810 425 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 MYL3P08590 195 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 C6orf222P0C671 652 aaPredicted RBP23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 STK4Q13043 487 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 PSMD2Q13200 908 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 FAM102BQ5T8I3 360 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 MYCT1Q8N699 235 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 TIPINQ9BVW5 301 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 GTPBP4Q9BZE4 634 aaKnown RBP23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 TUT1Q9H6E5 874 aaKnown RBP23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 SPC25Q9HBM1 224 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 HBP1O60381 514 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 GAP43P17677 238 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 POLGP54098 1239 aaPredicted RBP23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 GJA9P57773 515 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 EHHADHQ08426 723 aa23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 TARBP2Q15633 366 aaKnown RBP23.69■■□□□ 1.38
R3HCC1-208ENST00000522012 FAM26FQ5R3K3 315 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms