RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 PRRT2Q7Z6L0 340 aaPredicted RBP20.34■□□□□ 0.85
TRAPPC9-210ENST00000521667 DAW1Q8N136 415 aa20.34■□□□□ 0.85
TRAPPC9-210ENST00000521667 CCDC155Q8N6L0 562 aa20.34■□□□□ 0.85
TRAPPC9-210ENST00000521667 SENP7Q9BQF6 1050 aa20.34■□□□□ 0.85
TRAPPC9-210ENST00000521667 L2HGDHQ9H9P8 463 aa20.34■□□□□ 0.85
TRAPPC9-210ENST00000521667 ZMYM2Q9UBW7 1377 aa20.34■□□□□ 0.85
TRAPPC9-210ENST00000521667 FANCGO15287 622 aa20.33■□□□□ 0.85
TRAPPC9-210ENST00000521667 SLC16A3O15427 465 aaKnown RBP20.33■□□□□ 0.85
TRAPPC9-210ENST00000521667 TGFB1I1O43294 461 aa20.33■□□□□ 0.85
TRAPPC9-210ENST00000521667 RGS20O76081 388 aa20.33■□□□□ 0.85
TRAPPC9-210ENST00000521667 CDK17Q00537 523 aa20.33■□□□□ 0.85
TRAPPC9-210ENST00000521667 KCNMA1Q12791 1236 aa20.33■□□□□ 0.85
TRAPPC9-210ENST00000521667 NEK11Q8NG66 645 aa20.33■□□□□ 0.85
TRAPPC9-210ENST00000521667 TSC1Q92574 1164 aa20.33■□□□□ 0.85
TRAPPC9-210ENST00000521667 CDHR1Q96JP9 859 aa20.33■□□□□ 0.85
TRAPPC9-210ENST00000521667 MOV10L1Q9BXT6 1211 aaKnown RBP20.33■□□□□ 0.85
TRAPPC9-210ENST00000521667 EDEM3Q9BZQ6 932 aa20.33■□□□□ 0.85
TRAPPC9-210ENST00000521667 ARMCX3Q9UH62 379 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC9-210ENST00000521667 IQCA1LA6NCM1 817 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 SPDYE5A6NIY4 337 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 KCNA2P16389 499 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 HNRNPH3P31942 346 aaKnown RBP20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 PPP2R3AQ06190 1150 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 NFIL3Q16649 462 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 CLMNQ96JQ2 1002 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 CCDC43Q96MW1 224 aaKnown RBP20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 BTBD7Q9P203 1132 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 PCDHB13Q9Y5F0 798 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 LOXHD1Q8IVV2 1947 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 A0A0U1RQJ8 604 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 CXCL11O14625 94 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 AKAP3O75969 853 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 TTLL12Q14166 644 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 GNPTABQ3T906 1256 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 RIOX2Q8IUF8 465 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 ATRIPQ8WXE1 791 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 WDR24Q96S15 920 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 IWS1Q96ST2 819 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 METTL14Q9HCE5 456 aaKnown RBP20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 FBXO40Q9UH90 709 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 PLAGL2Q9UPG8 496 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 PCDHA10Q9Y5I2 948 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 LOC285556D6RIA3 1793 aa20.32■□□□□ 0.84
TRAPPC9-210ENST00000521667 SOCS7O14512 581 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 CLIC2O15247 247 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 CASQ1P31415 396 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 ARHGAP29Q52LW3 1261 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 SMAP1Q8IYB5 467 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 CCDC170Q8IYT3 715 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 ANKRD35Q8N283 1001 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 DNERQ8NFT8 737 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 ANKEF1Q9NU02 776 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 LARSQ9P2J5 1176 aaKnown RBP20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 CLEC11AQ9Y240 323 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 NFASCO94856 1347 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 KIF5CO60282 957 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 USO1O60763 962 aaKnown RBP20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 EPB41P11171 864 aaKnown RBP20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 CYLC1P35663 651 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 IRX3P78415 501 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 KCNH2Q12809 1159 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 MAEAQ7L5Y9 396 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 TIPINQ9BVW5 301 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 STRA6Q9BX79 667 aa20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 NHEJ1Q9H9Q4 299 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 REXO2Q9Y3B8 237 aaKnown RBP20.31■□□□□ 0.84
TRAPPC9-210ENST00000521667 PFASO15067 1338 aa20.3■□□□□ 0.84
TRAPPC9-210ENST00000521667 PTPRFP10586 1907 aa20.3■□□□□ 0.84
TRAPPC9-210ENST00000521667 A0A0G2JMZ2 1700 aa20.3■□□□□ 0.84
TRAPPC9-210ENST00000521667 SPATA31C2B4DYI2 1134 aa20.3■□□□□ 0.84
TRAPPC9-210ENST00000521667 PPP1R37O75864 691 aa20.3■□□□□ 0.84
TRAPPC9-210ENST00000521667 SLU7O95391 586 aaKnown RBP20.3■□□□□ 0.84
TRAPPC9-210ENST00000521667 MAPTP10636 758 aaKnown RBP20.3■□□□□ 0.84
TRAPPC9-210ENST00000521667 HS2ST1Q7LGA3 356 aa20.3■□□□□ 0.84
TRAPPC9-210ENST00000521667 KSR1Q8IVT5 923 aa20.3■□□□□ 0.84
TRAPPC9-210ENST00000521667 BAP1Q92560 729 aa20.3■□□□□ 0.84
TRAPPC9-210ENST00000521667 KCNH4Q9UQ05 1017 aa20.3■□□□□ 0.84
TRAPPC9-210ENST00000521667 BACH1O14867 736 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 PEX10O60683 326 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 XRCC5P13010 732 aaKnown RBP20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 UTP14CQ5TAP6 766 aaKnown RBP20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 MAP1SQ66K74 1059 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 RRAGAQ7L523 313 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 CACNA2D4Q7Z3S7 1137 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 LSM14BQ9BX40 385 aaKnown RBP20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 IRX2Q9BZI1 471 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 SPATC1LQ9H0A9 340 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 GBP3Q9H0R5 595 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 IKZF4Q9H2S9 585 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 JPH1Q9HDC5 661 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 CEP72Q9P209 647 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 TMEM150BA6NC51 233 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 LRRC53A6NM62 1247 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 K7ENM7 598 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 AFPP02771 609 aaKnown RBP20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 PLS3P13797 630 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 ARHGAP25P42331 645 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 CASP4P49662 377 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 KRT83P78385 493 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 PPIL2Q13356 520 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms