RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 AKR1B15C9JRZ8 316 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 CTIFO43310 598 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 MFAP3LO75121 409 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 LGR5O75473 907 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 GDF11O95390 407 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 ATP4AP20648 1035 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 SLC16A2P36021 539 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 TXKP42681 527 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 DNM2P50570 870 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 COPB1P53618 953 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 ASIC1P78348 528 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 KCNJ12Q14500 433 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 KRT31Q15323 416 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 UBE2SQ16763 222 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 FIGNQ5HY92 759 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 SH3PXD2AQ5TCZ1 1133 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 CEP135Q66GS9 1140 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 CENPPQ6IPU0 288 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 PPFIBP1Q86W92 1011 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 KIF18AQ8NI77 898 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 ETNPPLQ8TBG4 499 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 JDP2Q8WYK2 163 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 P2RX5Q93086 422 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 BAG1Q99933 345 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 NUP58Q9BVL2 599 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 COL25A1Q9BXS0 654 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 NIFKQ9BYG3 293 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 RUBCNLQ9H714 662 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 ZNF277Q9NRM2 450 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 MAGEC2Q9UBF1 373 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 PRR12Q9ULL5 1215 aa7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 MRPL11Q9Y3B7 192 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-228ENST00000521640 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 A0A1W2PRG0 241 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 FRMD3A2A2Y4 597 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 FAM196BA6NMK8 535 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 TCP10L2B9ZVM9 353 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 TMEM232C9JQI7 657 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 GPR25O00155 361 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 N4BP3O15049 544 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 WDR46O15213 610 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 RAD17O75943 681 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 RPA1P27694 616 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 CASP1P29466 404 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 CDC25AP30304 524 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 SETQ01105 290 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 CXCL9Q07325 125 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 KLHL10Q6JEL2 608 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 NIPA1Q7RTP0 329 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 C17orf53Q8N3J3 647 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 NEK9Q8TD19 979 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 LRRC15Q8TF66 581 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 GTPBP3Q969Y2 492 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 PPP1R13BQ96KQ4 1090 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 C16orf45Q96MC5 204 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 KIAA1683Q9H0B3 1180 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 TSPAN10Q9H1Z9 355 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 MYOZ2Q9NPC6 264 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 GDAQ9Y2T3 454 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 DOCK1Q14185 1865 aa7.45□□□□□ -1.22
CTNNA1-228ENST00000521640 A0A1W2PQJ5 194 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 MYMKA6NI61 221 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 WNT10BO00744 389 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 OPLAHO14841 1288 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 MARCH6O60337 910 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 CTNND1O60716 968 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 GNA14O95837 355 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 BCRP11274 1271 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 SEC13P55735 322 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 STX17P56962 302 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 ETF1P62495 437 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 JAG1P78504 1218 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 SPIRE1Q08AE8 756 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 IKQ13123 557 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 UBAP2LQ14157 1087 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 GAS6Q14393 721 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 RRP1BQ14684 758 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 ZNF662Q6ZS27 426 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 KRT26Q7Z3Y9 468 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 DEFB132Q7Z7B7 95 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 IRF2BP1Q8IU81 584 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 TMTC1Q8IUR5 882 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 ANKMY2Q8IV38 441 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 CCDC65Q8IXS2 484 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 SMYD4Q8IYR2 804 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 CSGALNACT2Q8N6G5 542 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 ZNF507Q8TCN5 953 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 STAMQ92783 540 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 LENG9Q96B70 501 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 CEP63Q96MT8 703 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 CNTNAP3BQ96NU0 1288 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 ERGIC2Q96RQ1 377 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 DUSP9Q99956 384 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 POLR3CQ9BUI4 534 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 SRRTQ9BXP5 876 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 CNTNAP3Q9BZ76 1288 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 EDEM3Q9BZQ6 932 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 NUCKS1Q9H1E3 243 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 L2HGDHQ9H9P8 463 aa7.44□□□□□ -1.22
CTNNA1-228ENST00000521640 KCND2Q9NZV8 630 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms