RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 RNPEPQ9H4A4 650 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 MYH7BA7E2Y1 1941 aa8.56□□□□□ -1.04
CTNNA1-227ENST00000521387 TCRBV5S4A2TA0A5A2 114 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 C17orf102A2RUQ5 167 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 PLA2G2AP14555 144 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 RASA1P20936 1047 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 FOSBP53539 338 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 MGAT3Q09327 533 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 CCDC158Q5M9N0 1113 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 SLFN13Q68D06 897 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 DCLRE1AQ6PJP8 1040 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 NPAS4Q8IUM7 802 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 PLEKHM2Q8IWE5 1019 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 OXER1Q8TDS5 423 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 STAG1Q8WVM7 1258 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 MRPS27Q92552 414 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 EMID1Q96A84 441 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 ACSF2Q96CM8 615 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 DDX23Q9BUQ8 820 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 SCNM1Q9BWG6 230 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 AGO3Q9H9G7 860 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 PRMT8Q9NR22 394 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 TLR7Q9NYK1 1049 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 DDX41Q9UJV9 622 aaKnown RBP8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 TEX15Q9BXT5 2789 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 LAMA1P25391 3075 aa8.55□□□□□ -1.04
CTNNA1-227ENST00000521387 RALGAPA1Q6GYQ0 2036 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 C2orf71A6NGG8 1288 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 SRGAP3O43295 1099 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 SMARCA5O60264 1052 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 SMIM10L2AP0DMW4 78 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 SMIM10L2BP0DMW5 78 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 EPCAMP16422 314 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 CALML3P27482 149 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 MFAP1P55081 439 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 ADAM17P78536 824 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 PLCB3Q01970 1234 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 MTX1Q13505 466 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 SF3A2Q15428 464 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 SLFNL1Q499Z3 407 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 TNNI3KQ59H18 835 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 BMP2KLQ5H9B9 411 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 TMC5Q6UXY8 1006 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 SEPT14Q6ZU15 432 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 GPR149Q86SP6 731 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 MRPL43Q8N983 215 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 COLGALT1Q8NBJ5 622 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 GMCL1P1Q8NEA9 526 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 PPTC7Q8NI37 304 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 CHMP4CQ96CF2 233 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 CWH43Q9H720 699 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 ARMT1Q9H993 441 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 NGRNQ9NPE2 291 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 DAXXQ9UER7 740 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 DBNLQ9UJU6 430 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 CCPG1Q9ULG6 757 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 PRR12Q9ULL5 1215 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 LZTS1Q9Y250 596 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 PCDHB12Q9Y5F1 795 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 FPGT-TNNI3KV9GXZ4 949 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 TICRRQ7Z2Z1 1910 aa8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 BAZ2AQ9UIF9 1905 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-227ENST00000521387 PTPDC1A2A3K4 754 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 PDE6AP16499 860 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 STAT2P52630 851 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 RPS6P62753 249 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 FZD5Q13467 585 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 FBXO47Q5MNV8 452 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 STPG1Q5TH74 334 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 THNSL1Q8IYQ7 743 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 CELF5Q8N6W0 485 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 SLC22A17Q8WUG5 538 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 CEP95Q96GE4 821 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 GPR20Q99678 358 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 BCO2Q9BYV7 579 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 C22orf23Q9BZE7 217 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 UPF2Q9HAU5 1272 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 ENTPD7Q9NQZ7 604 aa8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 TYW1Q9NV66 732 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-227ENST00000521387 DOCK8Q8NF50 2099 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 KANSL1LA0AUZ9 987 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 PLA2G6O60733 806 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 PPFIA4O75335 1185 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 KRT38O76015 456 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 GNAI2P04899 355 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 ICAM1P05362 532 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 SRSF1Q07955 248 aaKnown RBP eCLIP8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 C19orf57Q0VDD7 668 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 PTPN14Q15678 1187 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 HSDL1Q3SXM5 330 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 CTR9Q6PD62 1173 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 TMED8Q6PL24 325 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 RUFY4Q6ZNE9 571 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 CCDC149Q6ZUS6 474 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 FAM160B2Q86V87 743 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 PROSER1Q86XN7 944 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 ST13P5Q8NFI4 369 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 OTUD7AQ8TE49 926 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 CHURC1Q8WUH1 139 aa8.52□□□□□ -1.05
CTNNA1-227ENST00000521387 PIK3R5Q8WYR1 880 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms