RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 UPP2O95045 317 aa19.26■□□□□ 0.67
SQLE-205ENST00000521232 JAK3P52333 1124 aa19.26■□□□□ 0.67
SQLE-205ENST00000521232 GRB10Q13322 594 aa19.26■□□□□ 0.67
SQLE-205ENST00000521232 INF2Q27J81 1249 aa19.26■□□□□ 0.67
SQLE-205ENST00000521232 B3GNT9Q6UX72 402 aa19.26■□□□□ 0.67
SQLE-205ENST00000521232 RDM1Q8NG50 284 aa19.26■□□□□ 0.67
SQLE-205ENST00000521232 ETNPPLQ8TBG4 499 aa19.26■□□□□ 0.67
SQLE-205ENST00000521232 GJA10Q969M2 543 aa19.26■□□□□ 0.67
SQLE-205ENST00000521232 FAM167AQ96KS9 214 aa19.26■□□□□ 0.67
SQLE-205ENST00000521232 UNC45AQ9H3U1 944 aa19.26■□□□□ 0.67
SQLE-205ENST00000521232 CEP131Q9UPN4 1083 aa19.26■□□□□ 0.67
SQLE-205ENST00000521232 CCDC194A0A1B0GVG4 234 aa19.25■□□□□ 0.67
SQLE-205ENST00000521232 ZNF862O60290 1169 aa19.25■□□□□ 0.67
SQLE-205ENST00000521232 C22orf31O95567 290 aa19.25■□□□□ 0.67
SQLE-205ENST00000521232 CD52P31358 61 aa19.25■□□□□ 0.67
SQLE-205ENST00000521232 PPP4R3AQ6IN85 833 aa19.25■□□□□ 0.67
SQLE-205ENST00000521232 FAM43BQ6ZT52 329 aaPredicted RBP19.25■□□□□ 0.67
SQLE-205ENST00000521232 FTHL17Q9BXU8 183 aa19.25■□□□□ 0.67
SQLE-205ENST00000521232 SUGCTQ9HAC7 445 aa19.25■□□□□ 0.67
SQLE-205ENST00000521232 PRDM6Q9NQX0 595 aa19.25■□□□□ 0.67
SQLE-205ENST00000521232 NRBP2Q9NSY0 501 aa19.25■□□□□ 0.67
SQLE-205ENST00000521232 LMCD1Q9NZU5 365 aa19.25■□□□□ 0.67
SQLE-205ENST00000521232 DDX25Q9UHL0 483 aaKnown RBP19.25■□□□□ 0.67
SQLE-205ENST00000521232 PADI3Q9ULW8 664 aa19.25■□□□□ 0.67
SQLE-205ENST00000521232 MAGEB2O15479 319 aa19.24■□□□□ 0.67
SQLE-205ENST00000521232 LETM2Q2VYF4 491 aa19.24■□□□□ 0.67
SQLE-205ENST00000521232 TRMT1LQ7Z2T5 733 aaKnown RBP19.24■□□□□ 0.67
SQLE-205ENST00000521232 NEK8Q86SG6 692 aa19.24■□□□□ 0.67
SQLE-205ENST00000521232 RTN4RL1Q86UN2 441 aaPredicted RBP19.24■□□□□ 0.67
SQLE-205ENST00000521232 NSUN7Q8NE18 718 aaKnown RBP19.24■□□□□ 0.67
SQLE-205ENST00000521232 OXER1Q8TDS5 423 aa19.24■□□□□ 0.67
SQLE-205ENST00000521232 YME1L1Q96TA2 773 aa19.24■□□□□ 0.67
SQLE-205ENST00000521232 CHMP2AO43633 222 aa19.23■□□□□ 0.67
SQLE-205ENST00000521232 OATP04181 439 aa19.23■□□□□ 0.67
SQLE-205ENST00000521232 MIER3Q7Z3K6 550 aa19.23■□□□□ 0.67
SQLE-205ENST00000521232 FAM20AQ96MK3 541 aa19.23■□□□□ 0.67
SQLE-205ENST00000521232 SAMD11Q96NU1 681 aa19.23■□□□□ 0.67
SQLE-205ENST00000521232 COL25A1Q9BXS0 654 aaPredicted RBP19.23■□□□□ 0.67
SQLE-205ENST00000521232 CDHR5Q9HBB8 845 aa19.23■□□□□ 0.67
SQLE-205ENST00000521232 MTUS1Q9ULD2 1270 aa19.23■□□□□ 0.67
SQLE-205ENST00000521232 COL4A6Q14031 1691 aa19.23■□□□□ 0.67
SQLE-205ENST00000521232 TTC28Q96AY4 2481 aa19.23■□□□□ 0.67
SQLE-205ENST00000521232 SLC37A4O43826 429 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 GCFC2P16383 781 aaKnown RBP19.22■□□□□ 0.67
SQLE-205ENST00000521232 PRKCEQ02156 737 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 PAK2Q13177 524 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 UGCGQ16739 394 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 C8orf34Q49A92 452 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 EARS2Q5JPH6 523 aaKnown RBP19.22■□□□□ 0.67
SQLE-205ENST00000521232 KRT40Q6A162 431 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 PIK3AP1Q6ZUJ8 805 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 CRIPAKQ8N1N5 446 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 MICALL1Q8N3F8 863 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 LINC01465Q8N7H1 131 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 ATXN2LQ8WWM7 1075 aaKnown RBP19.22■□□□□ 0.67
SQLE-205ENST00000521232 LINC01599Q8WXQ3 324 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 NAP1L4Q99733 375 aaKnown RBP19.22■□□□□ 0.67
SQLE-205ENST00000521232 C17orf80Q9BSJ5 609 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 KCNMB3Q9NPA1 279 aa19.22■□□□□ 0.67
SQLE-205ENST00000521232 KRT2P35908 639 aa19.21■□□□□ 0.67
SQLE-205ENST00000521232 CRYBB1P53674 252 aaPredicted RBP19.21■□□□□ 0.67
SQLE-205ENST00000521232 EFCAB12Q6NXP0 572 aa19.21■□□□□ 0.67
SQLE-205ENST00000521232 METTL13Q8N6R0 699 aa19.21■□□□□ 0.67
SQLE-205ENST00000521232 GDPD5Q8WTR4 605 aa19.21■□□□□ 0.67
SQLE-205ENST00000521232 TNFRSF25Q93038 417 aa19.21■□□□□ 0.67
SQLE-205ENST00000521232 ZNF689Q96CS4 500 aaPredicted RBP19.21■□□□□ 0.67
SQLE-205ENST00000521232 NIFKQ9BYG3 293 aaKnown RBP19.21■□□□□ 0.67
SQLE-205ENST00000521232 TSPYL2Q9H2G4 693 aaPredicted RBP19.21■□□□□ 0.67
SQLE-205ENST00000521232 RC3H2Q9HBD1 1191 aaKnown RBP19.21■□□□□ 0.67
SQLE-205ENST00000521232 THEGQ9P2T0 379 aa19.21■□□□□ 0.67
SQLE-205ENST00000521232 LIMCH1Q9UPQ0 1083 aa19.21■□□□□ 0.67
SQLE-205ENST00000521232 GINS2Q9Y248 185 aa19.21■□□□□ 0.67
SQLE-205ENST00000521232 TBX3O15119 743 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 CCNT1O60563 726 aaKnown RBP19.2■□□□□ 0.66
SQLE-205ENST00000521232 JAK2O60674 1132 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 GPR32O75388 356 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 RPS6KA5O75582 802 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 STBD1O95210 358 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 TMOD1P28289 359 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 ST3GAL1Q11201 340 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 NR5A1Q13285 461 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 PPP2R5CQ13362 524 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 TARBP2Q15633 366 aaKnown RBP19.2■□□□□ 0.66
SQLE-205ENST00000521232 EPC2Q52LR7 807 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 ZNF710Q8N1W2 664 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 FBXO22Q8NEZ5 403 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 TMEM40Q8WWA1 233 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 KIF2CQ99661 725 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 TMX1Q9H3N1 280 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 BRMS1Q9HCU9 246 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 ERVK-5Q9HDB9 667 aa19.2■□□□□ 0.66
SQLE-205ENST00000521232 NOC2LQ9Y3T9 749 aaKnown RBP19.2■□□□□ 0.66
SQLE-205ENST00000521232 COL4A4P53420 1690 aaPredicted RBP19.2■□□□□ 0.66
SQLE-205ENST00000521232 DGKIO75912 1065 aa19.19■□□□□ 0.66
SQLE-205ENST00000521232 VTNP04004 478 aa19.19■□□□□ 0.66
SQLE-205ENST00000521232 NFX1Q12986 1120 aaKnown RBP19.19■□□□□ 0.66
SQLE-205ENST00000521232 KIZQ2M2Z5 673 aa19.19■□□□□ 0.66
SQLE-205ENST00000521232 TMEM266Q2M3C6 531 aa19.19■□□□□ 0.66
SQLE-205ENST00000521232 XKR3Q5GH77 459 aa19.19■□□□□ 0.66
SQLE-205ENST00000521232 TJAP1Q5JTD0 557 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms