RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 AMY2AP04746 511 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 PYGMP11217 842 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 AMY2BP19961 511 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 TGM1P22735 817 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 ECE1P42892 770 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 MRE11P49959 708 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 HERVK_113P62684 666 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 FNDC7Q5VTL7 733 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 SCUBE1Q8IWY4 988 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 PCDH19Q8TAB3 1148 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 ZNF483Q8TF39 744 aaPredicted RBP6.5□□□□□ -1.37
CLK4-207ENST00000520909 PTPRN2Q92932 1015 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 Q9UFV3 132 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 GIT1Q9Y2X7 761 aa6.5□□□□□ -1.37
CLK4-207ENST00000520909 NAT1P18440 290 aa6.49□□□□□ -1.37
CLK4-207ENST00000520909 CD83Q01151 205 aa6.49□□□□□ -1.37
CLK4-207ENST00000520909 GUCY1A3Q02108 690 aa6.49□□□□□ -1.37
CLK4-207ENST00000520909 D2HGDHQ8N465 521 aa6.49□□□□□ -1.37
CLK4-207ENST00000520909 ZNF669Q96BR6 464 aaPredicted RBP6.49□□□□□ -1.37
CLK4-207ENST00000520909 IPO9Q96P70 1041 aaKnown RBP6.49□□□□□ -1.37
CLK4-207ENST00000520909 SPATA9Q9BWV2 254 aa6.49□□□□□ -1.37
CLK4-207ENST00000520909 PARPBPQ9NWS1 579 aa6.49□□□□□ -1.37
CLK4-207ENST00000520909 BTBD7Q9P203 1132 aa6.49□□□□□ -1.37
CLK4-207ENST00000520909 MROH2BQ7Z745 1585 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 CYP27B1O15528 508 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 CLASP2O75122 1294 aaKnown RBP6.48□□□□□ -1.37
CLK4-207ENST00000520909 PPFIA2O75334 1257 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 C4BPAP04003 597 aaKnown RBP6.48□□□□□ -1.37
CLK4-207ENST00000520909 MC4RP32245 332 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 JAM2P57087 298 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 NANOS3P60323 173 aaKnown RBP6.48□□□□□ -1.37
CLK4-207ENST00000520909 FAM47CQ5HY64 1035 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 DNAJC10Q8IXB1 793 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 GPR135Q8IZ08 494 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 OR14K1Q8NGZ2 314 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 LARP4BQ92615 738 aaKnown RBP6.48□□□□□ -1.37
CLK4-207ENST00000520909 CDC6Q99741 560 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 TINF2Q9BSI4 451 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 UCKL1Q9NWZ5 548 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 FAM184BQ9ULE4 1060 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 CBLCQ9ULV8 474 aa6.48□□□□□ -1.37
CLK4-207ENST00000520909 REXO2Q9Y3B8 237 aaKnown RBP6.48□□□□□ -1.37
CLK4-207ENST00000520909 PMS2P1A4D2B8 440 aa6.47□□□□□ -1.37
CLK4-207ENST00000520909 SLC26A4O43511 780 aa6.47□□□□□ -1.37
CLK4-207ENST00000520909 SRGAP2CP0DJJ0 459 aa6.47□□□□□ -1.37
CLK4-207ENST00000520909 MRGPRGQ86SM5 289 aa6.47□□□□□ -1.37
CLK4-207ENST00000520909 LDLRAD3Q86YD5 345 aa6.47□□□□□ -1.37
CLK4-207ENST00000520909 TMPRSS6Q8IU80 811 aa6.47□□□□□ -1.37
CLK4-207ENST00000520909 SHCBP1Q8NEM2 672 aa6.47□□□□□ -1.37
CLK4-207ENST00000520909 ZG16BQ96DA0 208 aa6.47□□□□□ -1.37
CLK4-207ENST00000520909 TMEM176AQ96HP8 235 aa6.47□□□□□ -1.37
CLK4-207ENST00000520909 AMNQ9BXJ7 453 aa6.47□□□□□ -1.37
CLK4-207ENST00000520909 OR10A5Q9H207 317 aa6.47□□□□□ -1.37
CLK4-207ENST00000520909 BAZ1AQ9NRL2 1556 aaPredicted RBP6.47□□□□□ -1.37
CLK4-207ENST00000520909 CAPN14A8MX76 684 aa6.46□□□□□ -1.38
CLK4-207ENST00000520909 ARVCFO00192 962 aa6.46□□□□□ -1.38
CLK4-207ENST00000520909 MOGSQ13724 837 aa6.46□□□□□ -1.38
CLK4-207ENST00000520909 RAB33AQ14088 237 aa6.46□□□□□ -1.38
CLK4-207ENST00000520909 KANK2Q63ZY3 851 aa6.46□□□□□ -1.38
CLK4-207ENST00000520909 TMEM200BQ69YZ2 307 aa6.46□□□□□ -1.38
CLK4-207ENST00000520909 CEP72Q9P209 647 aa6.46□□□□□ -1.38
CLK4-207ENST00000520909 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 ZNF561-AS1K7EIQ3 104 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 MPIG6BO95866 241 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 TCF3P15923 654 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 DNM2P50570 870 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 SUMO1P63165 101 aaKnown RBP6.45□□□□□ -1.38
CLK4-207ENST00000520909 HGFACQ04756 655 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 GRAMD4Q6IC98 578 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 LRSAM1Q6UWE0 723 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 SLC43A3Q8NBI5 491 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 CLIP3Q96DZ5 547 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 MPHOSPH9Q99550 1183 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 PRRX2Q99811 253 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 TRIM55Q9BYV6 548 aa6.45□□□□□ -1.38
CLK4-207ENST00000520909 TRBV23-1A0A0A0MS06 115 aa6.44□□□□□ -1.38
CLK4-207ENST00000520909 CCDC66A2RUB6 948 aa6.44□□□□□ -1.38
CLK4-207ENST00000520909 KCNK3O14649 394 aa6.44□□□□□ -1.38
CLK4-207ENST00000520909 PEX11BO96011 259 aa6.44□□□□□ -1.38
CLK4-207ENST00000520909 LACTBP83111 547 aaPredicted RBP6.44□□□□□ -1.38
CLK4-207ENST00000520909 CRHR2Q13324 411 aa6.44□□□□□ -1.38
CLK4-207ENST00000520909 KRTAP15-1Q3LI76 137 aa6.44□□□□□ -1.38
CLK4-207ENST00000520909 SPTY2D1Q68D10 685 aaPredicted RBP6.44□□□□□ -1.38
CLK4-207ENST00000520909 ZC3H7AQ8IWR0 971 aaKnown RBP6.44□□□□□ -1.38
CLK4-207ENST00000520909 GMLQ99445 158 aa6.44□□□□□ -1.38
CLK4-207ENST00000520909 AGO3Q9H9G7 860 aaKnown RBP6.44□□□□□ -1.38
CLK4-207ENST00000520909 SLC2A4RGQ9NR83 387 aa6.44□□□□□ -1.38
CLK4-207ENST00000520909 SMARCA4P51532 1647 aa6.43□□□□□ -1.38
CLK4-207ENST00000520909 RAMP2O60895 175 aa6.43□□□□□ -1.38
CLK4-207ENST00000520909 MMEP08473 750 aa6.43□□□□□ -1.38
CLK4-207ENST00000520909 STAT5BP51692 787 aa6.43□□□□□ -1.38
CLK4-207ENST00000520909 RRP1BQ14684 758 aaKnown RBP6.43□□□□□ -1.38
CLK4-207ENST00000520909 SPATC1Q76KD6 591 aa6.43□□□□□ -1.38
CLK4-207ENST00000520909 ZNF627Q7L945 461 aa6.43□□□□□ -1.38
CLK4-207ENST00000520909 ULK2Q8IYT8 1036 aa6.43□□□□□ -1.38
CLK4-207ENST00000520909 ANKRD35Q8N283 1001 aa6.43□□□□□ -1.38
CLK4-207ENST00000520909 CRAMP1Q96RY5 1269 aa6.43□□□□□ -1.38
CLK4-207ENST00000520909 SMURF1Q9HCE7 757 aa6.43□□□□□ -1.38
CLK4-207ENST00000520909 PCDHA9Q9Y5H5 950 aa6.43□□□□□ -1.38
CLK4-207ENST00000520909 DMRT1Q9Y5R6 373 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms