RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 CDK8P49336 464 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 IFI35P80217 286 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 PLS1Q14651 629 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 NAIF1Q69YI7 327 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 ACTRT1Q8TDG2 376 aa13.92□□□□□ -0.18
TRAPPC9-208ENST00000520857 ABCB11O95342 1321 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 MRPL12P52815 198 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 BYSLQ13895 437 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 C10orf76Q5T2E6 689 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 TRMT1LQ7Z2T5 733 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 TRPM8Q7Z2W7 1104 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 TXNRD3Q86VQ6 643 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 FBXO25Q8TCJ0 367 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 SCFD2Q8WU76 684 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 STMN4Q9H169 189 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 GGA2Q9UJY4 613 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 USP54Q70EL1 1684 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 POTEFA5A3E0 1075 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 SFI1A8K8P3 1242 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 RASGRF2O14827 1237 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 CALCOCO2Q13137 446 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 POTEGQ6S5H5 508 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 POTEEQ6S8J3 1075 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 FAM129AQ9BZQ8 928 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 ZNF804BA4D1E1 1349 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 LRP6O75581 1613 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 F8W031 263 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 ACSL3O95573 720 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 ANP32DO95626 131 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 RPL13P26373 211 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 ZNF76P36508 570 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 VPS41P49754 854 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 PSEN1P49768 467 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 SIK1P57059 783 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 TAOK1Q7L7X3 1001 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 P3H4Q92791 437 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 SPZ1Q9BXG8 430 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 CHORDC1Q9UHD1 332 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 BCS1LQ9Y276 419 aa13.91□□□□□ -0.18
TRAPPC9-208ENST00000520857 RBAK-RBAKDNI3L0D1 243 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 RASA1P20936 1047 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 GSTO1P78417 241 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 ATP11AP98196 1134 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 HOMER3Q9NSC5 361 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 NOP53Q9NZM5 478 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 AIPL1Q9NZN9 384 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 M0R2N6 131 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 CALUO43852 315 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 CAMTA2O94983 1202 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 CRYMQ14894 314 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 ZFYVE27Q5T4F4 411 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 BRINP3Q76B58 766 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 SFR1Q86XK3 245 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 C3orf20Q8ND61 904 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 EPS8L3Q8TE67 593 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 ECT2Q9H8V3 914 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 NR2E1Q9Y466 385 aa13.9□□□□□ -0.18
TRAPPC9-208ENST00000520857 CHD4Q14839 1912 aa13.9□□□□□ -0.19
TRAPPC9-208ENST00000520857 PLCG2P16885 1265 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 MESDQ14696 234 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 ECM1Q16610 540 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 SLC35G2Q8TBE7 412 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 SCFD1Q8WVM8 642 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 CCT6BQ92526 530 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 IFT74Q96LB3 600 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 KDM4CQ9H3R0 1056 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 PSTPIP2Q9H939 334 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 ATP6V0A4Q9HBG4 840 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 ABCF3Q9NUQ8 709 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 FGFR1OP2Q9NVK5 253 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 TBK1Q9UHD2 729 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 SUN1O94901 812 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 UBOX5O94941 541 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 BTDP43251 543 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 CYP2J2P51589 502 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 PAGR1Q9BTK6 254 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 ANKRD2Q9GZV1 360 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 LRRC4CQ9HCJ2 640 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 DNM3Q9UQ16 869 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 LAMB4A4D0S4 1761 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 KDM3AQ9Y4C1 1321 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 USP17L15C9J2P7 530 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 USP17L13C9JLJ4 530 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 USP17L11C9JVI0 530 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 USP17L18D6R9N7 530 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 USP17L22D6RA61 530 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 USP17L17D6RBQ6 530 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 USP17L19D6RCP7 530 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 USP17L20D6RJB6 530 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 H0YGN5 161 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 SPOPO43791 374 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 FXR2P51116 673 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 USP17L24Q0WX57 530 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 PRR16Q569H4 304 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 SEL1L2Q5TEA6 688 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 USP17L6PQ6QN14 398 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 FBXO33Q7Z6M2 555 aa13.89□□□□□ -0.19
TRAPPC9-208ENST00000520857 ERP44Q9BS26 406 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms