RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 PAN2Q504Q3 1202 aaKnown RBP9.52□□□□□ -0.89
LSM1-202ENST00000520286 CCDC62Q6P9F0 684 aa9.52□□□□□ -0.89
LSM1-202ENST00000520286 SIRT2Q8IXJ6 389 aa9.52□□□□□ -0.89
LSM1-202ENST00000520286 HIPK4Q8NE63 616 aa9.52□□□□□ -0.89
LSM1-202ENST00000520286 TTLL11Q8NHH1 800 aa9.52□□□□□ -0.89
LSM1-202ENST00000520286 NMRK2Q9NPI5 230 aa9.52□□□□□ -0.89
LSM1-202ENST00000520286 ZC3H12DA2A288 527 aaKnown RBP9.51□□□□□ -0.89
LSM1-202ENST00000520286 ELL2O00472 640 aaPredicted RBP9.51□□□□□ -0.89
LSM1-202ENST00000520286 OSMP13725 252 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 AKAP5P24588 427 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 TRHRP34981 398 aaPredicted RBP9.51□□□□□ -0.89
LSM1-202ENST00000520286 GDNFP39905 211 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 GALK1P51570 392 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 GBX1Q14549 363 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 IFIT1BQ5T764 474 aaKnown RBP9.51□□□□□ -0.89
LSM1-202ENST00000520286 TIGD7Q6NT04 549 aaPredicted RBP9.51□□□□□ -0.89
LSM1-202ENST00000520286 RTN4RL1Q86UN2 441 aaPredicted RBP9.51□□□□□ -0.89
LSM1-202ENST00000520286 CILP2Q8IUL8 1156 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 LILRA2Q8N149 483 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 E2F7Q96AV8 911 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 FOXRED1Q96CU9 486 aaPredicted RBP9.51□□□□□ -0.89
LSM1-202ENST00000520286 TUBGCP5Q96RT8 1024 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 MPHOSPH6Q99547 160 aaKnown RBP9.51□□□□□ -0.89
LSM1-202ENST00000520286 CSRNP2Q9H175 543 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 TNFRSF12AQ9NP84 129 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 ZNF277Q9NRM2 450 aaPredicted RBP9.51□□□□□ -0.89
LSM1-202ENST00000520286 C19orf73Q9NVV2 129 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 ASB1Q9Y576 335 aa9.51□□□□□ -0.89
LSM1-202ENST00000520286 PRSS38A1L453 326 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 GOLGA6L22H0YM25 854 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 APOL3O95236 402 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 CYBBP04839 570 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 TRIM27P14373 513 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 FAHP16930 419 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 C5AR1P21730 350 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 GRM3Q14832 879 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 SNX17Q15036 470 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 BRD3Q15059 726 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 TTC38Q5R3I4 469 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 PAQR3Q6TCH7 311 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 KCNK18Q7Z418 384 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 MIER2Q8N344 545 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 FERMT2Q96AC1 680 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 SHISA4Q96DD7 197 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 SLC39A13Q96H72 371 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 ZNF700Q9H0M5 742 aa9.5□□□□□ -0.89
LSM1-202ENST00000520286 DBR1Q9UK59 544 aaKnown RBP9.5□□□□□ -0.89
LSM1-202ENST00000520286 F8W031 263 aaPredicted RBP9.49□□□□□ -0.89
LSM1-202ENST00000520286 AP1G1O43747 822 aa9.49□□□□□ -0.89
LSM1-202ENST00000520286 OFD1O75665 1012 aa9.49□□□□□ -0.89
LSM1-202ENST00000520286 PRPF6O94906 941 aaKnown RBP9.49□□□□□ -0.89
LSM1-202ENST00000520286 MTHFD2P13995 350 aa9.49□□□□□ -0.89
LSM1-202ENST00000520286 ADKP55263 362 aaKnown RBP9.49□□□□□ -0.89
LSM1-202ENST00000520286 MRPS9P82933 396 aaKnown RBP9.49□□□□□ -0.89
LSM1-202ENST00000520286 PITRM1Q5JRX3 1037 aa9.49□□□□□ -0.89
LSM1-202ENST00000520286 ZBTB41Q5SVQ8 909 aa9.49□□□□□ -0.89
LSM1-202ENST00000520286 SAMD3Q8N6K7 520 aa9.49□□□□□ -0.89
LSM1-202ENST00000520286 RUNDC1Q96C34 613 aa9.49□□□□□ -0.89
LSM1-202ENST00000520286 RAX2Q96IS3 184 aa9.49□□□□□ -0.89
LSM1-202ENST00000520286 SLC2A13Q96QE2 648 aa9.49□□□□□ -0.89
LSM1-202ENST00000520286 MYL10Q9BUA6 226 aa9.49□□□□□ -0.89
LSM1-202ENST00000520286 WNT8AQ9H1J5 351 aa9.49□□□□□ -0.89
LSM1-202ENST00000520286 SAP30BPQ9UHR5 308 aaKnown RBP9.49□□□□□ -0.89
LSM1-202ENST00000520286 COMMD10Q9Y6G5 202 aa9.49□□□□□ -0.89
LSM1-202ENST00000520286 FRMPD2Q68DX3 1309 aaPredicted RBP9.49□□□□□ -0.89
LSM1-202ENST00000520286 PRAMEF22A3QJZ6 481 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 NDUFS2O75306 463 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 EIF3JO75822 258 aaKnown RBP9.48□□□□□ -0.89
LSM1-202ENST00000520286 ZBTB7AO95365 584 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 LPLP06858 475 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 RAC2P15153 192 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 AOAHP28039 575 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 PRAMEF18Q5VWM3 479 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 B3GNT9Q6UX72 402 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 DTX1Q86Y01 620 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 SVIPQ8NHG7 77 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 SLC35G2Q8TBE7 412 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 MYLIPQ8WY64 445 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 MAML3Q96JK9 1138 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 SARGQ9BW04 601 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 SLC12A5Q9H2X9 1139 aa9.48□□□□□ -0.89
LSM1-202ENST00000520286 PAK6Q9NQU5 681 aaPredicted RBP9.48□□□□□ -0.89
LSM1-202ENST00000520286 DDX20Q9UHI6 824 aaKnown RBP9.48□□□□□ -0.89
LSM1-202ENST00000520286 ANGEL1Q9UNK9 670 aaKnown RBP9.48□□□□□ -0.89
LSM1-202ENST00000520286 MED26O95402 600 aa9.47□□□□□ -0.89
LSM1-202ENST00000520286 PRLP01236 227 aa9.47□□□□□ -0.89
LSM1-202ENST00000520286 SLC5A3P53794 718 aa9.47□□□□□ -0.89
LSM1-202ENST00000520286 DBPQ10586 325 aaPredicted RBP9.47□□□□□ -0.89
LSM1-202ENST00000520286 PRAMEF9Q5VWM5 478 aa9.47□□□□□ -0.89
LSM1-202ENST00000520286 SMC5Q8IY18 1101 aa9.47□□□□□ -0.89
LSM1-202ENST00000520286 FBXO41Q8TF61 875 aa9.47□□□□□ -0.89
LSM1-202ENST00000520286 AUTS2Q8WXX7 1259 aa9.47□□□□□ -0.89
LSM1-202ENST00000520286 C1orf112Q9NSG2 853 aa9.47□□□□□ -0.89
LSM1-202ENST00000520286 BTBD7Q9P203 1132 aa9.47□□□□□ -0.89
LSM1-202ENST00000520286 EIF4G1Q04637 1599 aaKnown RBP9.46□□□□□ -0.89
LSM1-202ENST00000520286 ST20-MTHFSA0A0A6YYL1 179 aa9.46□□□□□ -0.9
LSM1-202ENST00000520286 SLC6A3Q01959 620 aa9.46□□□□□ -0.9
LSM1-202ENST00000520286 ZNF267Q14586 743 aaPredicted RBP9.46□□□□□ -0.9
LSM1-202ENST00000520286 MYBPC3Q14896 1274 aa9.46□□□□□ -0.9
LSM1-202ENST00000520286 SLC9A5Q14940 896 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms