RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 DOCK5Q9H7D0 1870 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 ACACBO00763 2458 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 CCDC171Q6TFL3 1326 aa5.72□□□□□ -1.49
SDCBP-207ENST00000520168 WDFY3Q8IZQ1 3526 aa5.71□□□□□ -1.49
SDCBP-207ENST00000520168 PATL2C9JE40 543 aaKnown RBP5.71□□□□□ -1.5
SDCBP-207ENST00000520168 GPAA1O43292 621 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 RAB11FIP3O75154 756 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 EIF3JO75822 258 aaKnown RBP5.71□□□□□ -1.5
SDCBP-207ENST00000520168 DGKIO75912 1065 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 PDGFBP01127 241 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-207ENST00000520168 APPP05067 770 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 ITGB1P05556 798 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 STAG3L1P0CL83 205 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 TGFB3P10600 412 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 AOC1P19801 751 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 NOVP48745 357 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 ITIH3Q06033 890 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 CAMK1Q14012 370 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 FAM26DQ5JW98 314 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 ADGRD2Q7Z7M1 963 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 RSPH3Q86UC2 560 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 MCF2L2Q86YR7 1114 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 ITPRIPQ8IWB1 547 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 CCDC105Q8IYK2 499 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 STK11IPQ8N1F8 1099 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 GPR161Q8N6U8 529 aaKnown RBP5.71□□□□□ -1.5
SDCBP-207ENST00000520168 SPPL3Q8TCT6 385 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 ATP8B4Q8TF62 1192 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 POF1BQ8WVV4 589 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 APPBP2Q92624 585 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 CDK15Q96Q40 435 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 USP26Q9BXU7 913 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 FTHL17Q9BXU8 183 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 BOLA2Q9H3K6 86 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 TLE6Q9H808 572 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 PCDHB12Q9Y5F1 795 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 MIA3Q5JRA6 1907 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 TPRP12270 2363 aaKnown RBP5.71□□□□□ -1.5
SDCBP-207ENST00000520168 ABCB11O95342 1321 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 NCOR2Q9Y618 2525 aa5.71□□□□□ -1.5
SDCBP-207ENST00000520168 H3BRB1 525 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 BRD1O95696 1058 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 SMIM10L2AP0DMW4 78 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 SMIM10L2BP0DMW5 78 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 CTHP32929 405 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 SNAP25P60880 206 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 ZNF200P98182 395 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-207ENST00000520168 PPARAQ07869 468 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 ANGPT1Q15389 498 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 DUSP6Q16828 381 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 ST3GAL2Q16842 350 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 SLFNL1Q499Z3 407 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 GPATCH4Q5T3I0 446 aaKnown RBP5.7□□□□□ -1.5
SDCBP-207ENST00000520168 ARHGEF16Q5VV41 709 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 MYSM1Q5VVJ2 828 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 CES5AQ6NT32 575 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 TAF2Q6P1X5 1199 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 LYPD8Q6UX82 237 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 KIAA2013Q8IYS2 634 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 IFNL3Q8IZI9 196 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 SAMD3Q8N6K7 520 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 KLHL23Q8NBE8 558 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 KCNG4Q8TDN1 519 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 RUBCNQ92622 972 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 SPATA33Q96N06 139 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 RMDN3Q96TC7 470 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 HINFPQ9BQA5 517 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 NAPBQ9H115 298 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 TUT1Q9H6E5 874 aaKnown RBP5.7□□□□□ -1.5
SDCBP-207ENST00000520168 EPB41L4AQ9HCS5 686 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-207ENST00000520168 MAP3K20Q9NYL2 800 aaKnown RBP5.7□□□□□ -1.5
SDCBP-207ENST00000520168 ZNF215Q9UL58 517 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-207ENST00000520168 LZTS1Q9Y250 596 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 SQORQ9Y6N5 450 aa5.7□□□□□ -1.5
SDCBP-207ENST00000520168 EP300Q09472 2414 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-207ENST00000520168 CEP250Q9BV73 2442 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 PATJQ8NI35 1801 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 SOBPA7XYQ1 873 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 ENPP3O14638 875 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 RNF113AO15541 343 aaKnown RBP5.69□□□□□ -1.5
SDCBP-207ENST00000520168 TREHO43280 583 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 CTSHP09668 335 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 HSPD1P10809 573 aaKnown RBP5.69□□□□□ -1.5
SDCBP-207ENST00000520168 TOP1P11387 765 aaKnown RBP5.69□□□□□ -1.5
SDCBP-207ENST00000520168 DNAJB1P25685 340 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 SLC16A2P36021 539 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 TECP42680 631 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 MTHFRP42898 656 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 NT5C2P49902 561 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 NR5A1Q13285 461 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 KCNC3Q14003 757 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 HSDL1Q3SXM5 330 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 CELF3Q5SZQ8 465 aaKnown RBP5.69□□□□□ -1.5
SDCBP-207ENST00000520168 KIAA0319Q5VV43 1072 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 ANKRD54Q6NXT1 300 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 TSHZ1Q6ZSZ6 1077 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 RBM23Q86U06 439 aaKnown RBP5.69□□□□□ -1.5
SDCBP-207ENST00000520168 NPAS4Q8IUM7 802 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 ZDHHC14Q8IZN3 488 aa5.69□□□□□ -1.5
SDCBP-207ENST00000520168 KBTBD3Q8NAB2 608 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms