RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 DNAJB3Q8WWF6 145 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 RAB34Q9BZG1 259 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 ZSWIM4Q9H7M6 989 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 LRWD1Q9UFC0 647 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 CEP131Q9UPN4 1083 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 CLIC4Q9Y696 253 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 EVPLQ92817 2033 aa13.27□□□□□ -0.29
HPS4-218ENST00000519774 PP2D1A8MPX8 630 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 RBAK-RBAKDNI3L0D1 243 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 MED24O75448 989 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 SLITRK3O94933 977 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 STBD1O95210 358 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 C22orf31O95567 290 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 IQCF3P0C7M6 154 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 ACRP10323 421 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 ANP32AP39687 249 aaKnown RBP13.26□□□□□ -0.29
HPS4-218ENST00000519774 CCT6AP40227 531 aaKnown RBP13.26□□□□□ -0.29
HPS4-218ENST00000519774 EPHB4P54760 987 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 TBC1D8BQ0IIM8 1120 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 IL17AQ16552 155 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 HAUS3Q68CZ6 603 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 ANO5Q75V66 913 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 DEFB128Q7Z7B8 93 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 RSPH3Q86UC2 560 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 C4orf19Q8IY42 314 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 METTL13Q8N6R0 699 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 SNX29Q8TEQ0 813 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 CCDC43Q96MW1 224 aaKnown RBP13.26□□□□□ -0.29
HPS4-218ENST00000519774 USP28Q96RU2 1077 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 DAXXQ9UER7 740 aaPredicted RBP13.26□□□□□ -0.29
HPS4-218ENST00000519774 COLQQ9Y215 455 aaPredicted RBP13.26□□□□□ -0.29
HPS4-218ENST00000519774 PCDHA2Q9Y5H9 948 aa13.26□□□□□ -0.29
HPS4-218ENST00000519774 SIP14410 1827 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 SMIM35A0A1B0GVV1 85 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 RSPH10B2B2RC85 870 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 ZBTB39O15060 712 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 RSPH10BP0C881 870 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 MARCKSP29966 332 aaPredicted RBP13.25□□□□□ -0.29
HPS4-218ENST00000519774 YWHABP31946 246 aaKnown RBP13.25□□□□□ -0.29
HPS4-218ENST00000519774 CLCN3P51790 818 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 NPEPPSP55786 919 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 TMEM62Q0P6H9 643 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 XKR9Q5GH70 373 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 ARL6IP4Q66PJ3 421 aaKnown RBP13.25□□□□□ -0.29
HPS4-218ENST00000519774 POTEGQ6S5H5 508 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 CATSPER3Q86XQ3 398 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 IGSF22Q8N9C0 903 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 CEP170P1Q96L14 293 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 ZNF396Q96N95 335 aaPredicted RBP13.25□□□□□ -0.29
HPS4-218ENST00000519774 HSD17B14Q9BPX1 270 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 NIFKQ9BYG3 293 aaKnown RBP13.25□□□□□ -0.29
HPS4-218ENST00000519774 TUFT1Q9NNX1 390 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 IL23AQ9NPF7 189 aa13.25□□□□□ -0.29
HPS4-218ENST00000519774 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
HPS4-218ENST00000519774 A0A087WWV3 80 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 MAGEB2O15479 319 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 CAND2O75155 1236 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 LYPLA2O95372 231 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 SPATA31C1P0DKV0 1188 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 CDC25AP30304 524 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 RFC2P35250 354 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 MRPS6P82932 125 aaKnown RBP13.24□□□□□ -0.29
HPS4-218ENST00000519774 PDIA5Q14554 519 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 PTPAQ15257 358 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 TARBP2Q15633 366 aaKnown RBP13.24□□□□□ -0.29
HPS4-218ENST00000519774 ZRSR1Q15695 479 aaKnown RBP13.24□□□□□ -0.29
HPS4-218ENST00000519774 EFCAB12Q6NXP0 572 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 TRAF7Q6Q0C0 670 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 OTUD6AQ7L8S5 288 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 LRRC71Q8N4P6 559 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 PIGOQ8TEQ8 1089 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 MAP7D2Q96T17 732 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 PPP1R16BQ96T49 567 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 POLR3CQ9BUI4 534 aaPredicted RBP13.24□□□□□ -0.29
HPS4-218ENST00000519774 SUGCTQ9HAC7 445 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 CYP26B1Q9NR63 512 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 TFIP11Q9UBB9 837 aaKnown RBP13.24□□□□□ -0.29
HPS4-218ENST00000519774 CDY2AQ9Y6F7 541 aa13.24□□□□□ -0.29
HPS4-218ENST00000519774 M0QZ92 97 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 BRD1O95696 1058 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 VTNP04004 478 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 RPA1P27694 616 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 BMP8BP34820 402 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 POLGP54098 1239 aaPredicted RBP13.23□□□□□ -0.29
HPS4-218ENST00000519774 GRIN1Q05586 938 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 MBTPS1Q14703 1052 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 STK38Q15208 465 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 C9orf50Q5SZB4 431 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 KRT79Q5XKE5 535 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 PSRC1Q6PGN9 363 aaPredicted RBP13.23□□□□□ -0.29
HPS4-218ENST00000519774 ZNF365Q70YC5 407 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 RPUSD2Q8IZ73 545 aaKnown RBP13.23□□□□□ -0.29
HPS4-218ENST00000519774 ZNF579Q8NAF0 562 aaKnown RBP13.23□□□□□ -0.29
HPS4-218ENST00000519774 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.23□□□□□ -0.29
HPS4-218ENST00000519774 PRO3102Q9H379 93 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 AKT3Q9Y243 479 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 GINS2Q9Y248 185 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 ZDHHC9Q9Y397 364 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 TRPV2Q9Y5S1 764 aa13.23□□□□□ -0.29
HPS4-218ENST00000519774 STK24Q9Y6E0 443 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms