RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 IL13RA1P78552 427 aa4.7□□□□□ -1.66
CSMD3-209ENST00000519485 HGFACQ04756 655 aa4.7□□□□□ -1.66
CSMD3-209ENST00000519485 DPY19L2P1Q6NXN4 242 aa4.7□□□□□ -1.66
CSMD3-209ENST00000519485 KCNT2Q6UVM3 1135 aa4.7□□□□□ -1.66
CSMD3-209ENST00000519485 LARP4Q71RC2 724 aaKnown RBP eCLIP4.7□□□□□ -1.66
CSMD3-209ENST00000519485 DPH6Q7L8W6 267 aa4.7□□□□□ -1.66
CSMD3-209ENST00000519485 SCUBE1Q8IWY4 988 aa4.7□□□□□ -1.66
CSMD3-209ENST00000519485 MPHOSPH9Q99550 1183 aa4.7□□□□□ -1.66
CSMD3-209ENST00000519485 KCNJ15Q99712 375 aa4.7□□□□□ -1.66
CSMD3-209ENST00000519485 GALNT8Q9NY28 637 aa4.7□□□□□ -1.66
CSMD3-209ENST00000519485 SRPK3Q9UPE1 567 aa4.7□□□□□ -1.66
CSMD3-209ENST00000519485 FOXN1O15353 648 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 PTGS1P23219 599 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 HERVK_113P62684 666 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 RAB33AQ14088 237 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 GRM7Q14831 915 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 BTBD8Q5XKL5 378 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 TMEM200BQ69YZ2 307 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 CLIP3Q96DZ5 547 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 BTBD2Q9BX70 525 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 CD244Q9BZW8 370 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 KIAA1683Q9H0B3 1180 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 INCENPQ9NQS7 918 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 ARHGAP28Q9P2N2 729 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 NACADO15069 1562 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 BAZ1AQ9NRL2 1556 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-209ENST00000519485 BAZ1BQ9UIG0 1483 aaKnown RBP4.69□□□□□ -1.66
CSMD3-209ENST00000519485 CEP164Q9UPV0 1460 aa4.69□□□□□ -1.66
CSMD3-209ENST00000519485 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-209ENST00000519485 IQCA1LA6NCM1 817 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 TMEM191CA6NGB0 347 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 FAM90A27PA6NNH2 459 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 KLF4O43474 513 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 SLC26A4O43511 780 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 AOAHP28039 575 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 ADRA1BP35368 520 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 KCNQ1P51787 676 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 GPR19Q15760 415 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 KANK2Q63ZY3 851 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 SPTY2D1Q68D10 685 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-209ENST00000519485 OSBP2Q969R2 916 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 ALG1Q9BT22 464 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 AARSD1Q9BTE6 412 aaKnown RBP4.68□□□□□ -1.66
CSMD3-209ENST00000519485 IPPKQ9H8X2 491 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 BTBD7Q9P203 1132 aa4.68□□□□□ -1.66
CSMD3-209ENST00000519485 MAFO75444 373 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-209ENST00000519485 PABPC1P11940 636 aaKnown RBP4.67□□□□□ -1.66
CSMD3-209ENST00000519485 MRE11P49959 708 aa4.67□□□□□ -1.66
CSMD3-209ENST00000519485 PCOLCEQ15113 449 aa4.67□□□□□ -1.66
CSMD3-209ENST00000519485 FIGNQ5HY92 759 aa4.67□□□□□ -1.66
CSMD3-209ENST00000519485 SGMS1Q86VZ5 419 aa4.67□□□□□ -1.66
CSMD3-209ENST00000519485 ARHGEF4Q9NR80 690 aa4.67□□□□□ -1.66
CSMD3-209ENST00000519485 HECAQ9UBI9 543 aaPredicted RBP4.67□□□□□ -1.66
CSMD3-209ENST00000519485 VPS8Q8N3P4 1428 aa4.66□□□□□ -1.66
CSMD3-209ENST00000519485 SCRIBQ14160 1630 aa4.66□□□□□ -1.66
CSMD3-209ENST00000519485 A0A0G2JNJ9 132 aa4.66□□□□□ -1.66
CSMD3-209ENST00000519485 CAPN14A8MX76 684 aa4.66□□□□□ -1.66
CSMD3-209ENST00000519485 ANP32CO43423 234 aa4.66□□□□□ -1.66
CSMD3-209ENST00000519485 MEOX1P50221 254 aa4.66□□□□□ -1.66
CSMD3-209ENST00000519485 RRP1BQ14684 758 aaKnown RBP4.66□□□□□ -1.66
CSMD3-209ENST00000519485 LRRC47Q8N1G4 583 aaKnown RBP4.66□□□□□ -1.66
CSMD3-209ENST00000519485 D2HGDHQ8N465 521 aa4.66□□□□□ -1.66
CSMD3-209ENST00000519485 SHCBP1Q8NEM2 672 aa4.66□□□□□ -1.66
CSMD3-209ENST00000519485 ST13P5Q8NFI4 369 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-209ENST00000519485 C8orf37Q96NL8 207 aa4.66□□□□□ -1.66
CSMD3-209ENST00000519485 HIRIP3Q9BW71 556 aaPredicted RBP4.66□□□□□ -1.66
CSMD3-209ENST00000519485 AGO3Q9H9G7 860 aaKnown RBP4.66□□□□□ -1.66
CSMD3-209ENST00000519485 RIC8BQ9NVN3 520 aa4.66□□□□□ -1.66
CSMD3-209ENST00000519485 Q9UFV3 132 aa4.66□□□□□ -1.66
CSMD3-209ENST00000519485 KIF21BO75037 1637 aa4.65□□□□□ -1.66
CSMD3-209ENST00000519485 MAN2B1O00754 1011 aa4.65□□□□□ -1.67
CSMD3-209ENST00000519485 PRODHO43272 600 aa4.65□□□□□ -1.67
CSMD3-209ENST00000519485 MPIG6BO95866 241 aa4.65□□□□□ -1.67
CSMD3-209ENST00000519485 C4BPAP04003 597 aaKnown RBP4.65□□□□□ -1.67
CSMD3-209ENST00000519485 MTERF2Q49AM1 385 aa4.65□□□□□ -1.67
CSMD3-209ENST00000519485 NSMFQ6X4W1 530 aa4.65□□□□□ -1.67
CSMD3-209ENST00000519485 ARHGAP36Q6ZRI8 547 aa4.65□□□□□ -1.67
CSMD3-209ENST00000519485 FILIP1Q7Z7B0 1213 aa4.65□□□□□ -1.67
CSMD3-209ENST00000519485 RPUSD2Q8IZ73 545 aaKnown RBP4.65□□□□□ -1.67
CSMD3-209ENST00000519485 ANKRD35Q8N283 1001 aa4.65□□□□□ -1.67
CSMD3-209ENST00000519485 RABGGTAQ92696 567 aa4.65□□□□□ -1.67
CSMD3-209ENST00000519485 IPO9Q96P70 1041 aaKnown RBP4.65□□□□□ -1.67
CSMD3-209ENST00000519485 OR10A5Q9H207 317 aa4.65□□□□□ -1.67
CSMD3-209ENST00000519485 SLC2A4RGQ9NR83 387 aa4.65□□□□□ -1.67
CSMD3-209ENST00000519485 ATP23Q9Y6H3 246 aa4.65□□□□□ -1.67
CSMD3-209ENST00000519485 TRAV20A0A0B4J274 112 aa4.64□□□□□ -1.67
CSMD3-209ENST00000519485 PDPK1O15530 556 aa4.64□□□□□ -1.67
CSMD3-209ENST00000519485 CLASP2O75122 1294 aaKnown RBP4.64□□□□□ -1.67
CSMD3-209ENST00000519485 AMY2AP04746 511 aa4.64□□□□□ -1.67
CSMD3-209ENST00000519485 PDE6AP16499 860 aa4.64□□□□□ -1.67
CSMD3-209ENST00000519485 AMY2BP19961 511 aa4.64□□□□□ -1.67
CSMD3-209ENST00000519485 ADCY8P40145 1251 aa4.64□□□□□ -1.67
CSMD3-209ENST00000519485 ECE1P42892 770 aa4.64□□□□□ -1.67
CSMD3-209ENST00000519485 IFRD2Q12894 506 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-209ENST00000519485 PAK1Q13153 545 aa4.64□□□□□ -1.67
CSMD3-209ENST00000519485 SF3A1Q15459 793 aaKnown RBP4.64□□□□□ -1.67
CSMD3-209ENST00000519485 OTOP2Q7RTS6 562 aa4.64□□□□□ -1.67
CSMD3-209ENST00000519485 RTKN2Q8IZC4 609 aa4.64□□□□□ -1.67
CSMD3-209ENST00000519485 LPPQ93052 612 aa4.64□□□□□ -1.67
CSMD3-209ENST00000519485 TTPALQ9BTX7 342 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms