RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PADI3Q9ULW8 664 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 SAMM50Q9Y512 469 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 TRPV2Q9Y5S1 764 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 MTCH2Q9Y6C9 303 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 PTPRSQ13332 1948 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 COL1A2P08123 1366 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 WDR64B1ANS9 1081 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 DLL1O00548 723 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 SLC37A4O43826 429 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 JAK2O60674 1132 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 GAS7O60861 476 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 C22orf31O95567 290 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 RPLP2P05387 115 aaKnown RBP10.55□□□□□ -0.72
HDAC3-215ENST00000519474 XBP1P17861 261 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 CD52P31358 61 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 SFNP31947 248 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 NR5A1Q13285 461 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 GRB10Q13322 594 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 TARBP2Q15633 366 aaKnown RBP10.55□□□□□ -0.72
HDAC3-215ENST00000519474 UGCGQ16739 394 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 LRCH2Q5VUJ6 765 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 KRT40Q6A162 431 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 TSHZ1Q6ZSZ6 1077 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 PIK3AP1Q6ZUJ8 805 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 CRIPAKQ8N1N5 446 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 SP7Q8TDD2 431 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-215ENST00000519474 WASF1Q92558 559 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 HAS1Q92839 578 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 CEP89Q96ST8 783 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 KCNMB3Q9NPA1 279 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 DDX25Q9UHL0 483 aaKnown RBP10.55□□□□□ -0.72
HDAC3-215ENST00000519474 LIMCH1Q9UPQ0 1083 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 KDM3AQ9Y4C1 1321 aa10.55□□□□□ -0.72
HDAC3-215ENST00000519474 CCDC194A0A1B0GVG4 234 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 FAM205CA6NFA0 338 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 BTBD18B2RXH4 712 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 EML1O00423 815 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 MAGEB2O15479 319 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 CHMP2AO43633 222 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 GPR32O75388 356 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 EFCAB12Q6NXP0 572 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 MIER3Q7Z3K6 550 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 NEK8Q86SG6 692 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 LINC01465Q8N7H1 131 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 RDM1Q8NG50 284 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 TMEM40Q8WWA1 233 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 LINC01599Q8WXQ3 324 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 EVPLQ92817 2033 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 FAM20AQ96MK3 541 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 TGS1Q96RS0 853 aaKnown RBP10.54□□□□□ -0.72
HDAC3-215ENST00000519474 C17orf80Q9BSJ5 609 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 NIFKQ9BYG3 293 aaKnown RBP10.54□□□□□ -0.72
HDAC3-215ENST00000519474 TMX1Q9H3N1 280 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 NOC2LQ9Y3T9 749 aaKnown RBP10.54□□□□□ -0.72
HDAC3-215ENST00000519474 IGSF9BQ9UPX0 1349 aa10.54□□□□□ -0.72
HDAC3-215ENST00000519474 CCNT1O60563 726 aaKnown RBP10.53□□□□□ -0.72
HDAC3-215ENST00000519474 MMP1P03956 469 aa10.53□□□□□ -0.72
HDAC3-215ENST00000519474 RBM25P49756 843 aaKnown RBP10.53□□□□□ -0.72
HDAC3-215ENST00000519474 JAK3P52333 1124 aa10.53□□□□□ -0.72
HDAC3-215ENST00000519474 CRYBB1P53674 252 aaPredicted RBP10.53□□□□□ -0.72
HDAC3-215ENST00000519474 TMEM266Q2M3C6 531 aa10.53□□□□□ -0.72
HDAC3-215ENST00000519474 METTL13Q8N6R0 699 aa10.53□□□□□ -0.72
HDAC3-215ENST00000519474 ZNF689Q96CS4 500 aaPredicted RBP10.53□□□□□ -0.72
HDAC3-215ENST00000519474 ADAMTS10Q9H324 1103 aa10.53□□□□□ -0.72
HDAC3-215ENST00000519474 ERVK-5Q9HDB9 667 aa10.53□□□□□ -0.72
HDAC3-215ENST00000519474 TCEAL9Q9UHQ7 104 aa10.53□□□□□ -0.72
HDAC3-215ENST00000519474 MYH9P35579 1960 aaKnown RBP10.52□□□□□ -0.72
HDAC3-215ENST00000519474 IGKV6-21A0A0C4DH24 114 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 TMEM150BA6NC51 233 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 DDX11L8A8MPP1 907 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 M0QZ92 97 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 WNT7AO00755 349 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 TBX3O15119 743 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 MGEA5O60502 916 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 DGKIO75912 1065 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 VTNP04004 478 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 OATP04181 439 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 GCFC2P16383 781 aaKnown RBP10.52□□□□□ -0.73
HDAC3-215ENST00000519474 KRT2P35908 639 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 CLCN3P51790 818 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 NLRP11P59045 1033 aaKnown RBP10.52□□□□□ -0.73
HDAC3-215ENST00000519474 FAM189BP81408 668 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 RBM10P98175 930 aaKnown RBP10.52□□□□□ -0.73
HDAC3-215ENST00000519474 NFX1Q12986 1120 aaKnown RBP10.52□□□□□ -0.73
HDAC3-215ENST00000519474 PPP2R5CQ13362 524 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 KIZQ2M2Z5 673 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 EPC2Q52LR7 807 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 XKR3Q5GH77 459 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 CCDC83Q8IWF9 413 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 FAM167AQ96KS9 214 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 ZSCAN31Q96LW9 406 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-215ENST00000519474 YME1L1Q96TA2 773 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 SH2D3AQ9BRG2 576 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 COL25A1Q9BXS0 654 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-215ENST00000519474 FTHL17Q9BXU8 183 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 TSPYL2Q9H2G4 693 aaPredicted RBP10.52□□□□□ -0.73
HDAC3-215ENST00000519474 LMCD1Q9NZU5 365 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 VAV3Q9UKW4 847 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 MTUS1Q9ULD2 1270 aa10.52□□□□□ -0.73
HDAC3-215ENST00000519474 ST3GAL5Q9UNP4 418 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms