RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 WNT8BQ93098 351 aa25.28■■□□□ 1.64
SKP1-206ENST00000519321 AK8Q96MA6 479 aa25.28■■□□□ 1.64
SKP1-206ENST00000519321 UBE2OQ9C0C9 1292 aaKnown RBP25.28■■□□□ 1.64
SKP1-206ENST00000519321 WRAP73Q9P2S5 460 aaPredicted RBP25.28■■□□□ 1.64
SKP1-206ENST00000519321 CLIC4Q9Y696 253 aa25.28■■□□□ 1.64
SKP1-206ENST00000519321 MORC2Q9Y6X9 1032 aaPredicted RBP25.28■■□□□ 1.64
SKP1-206ENST00000519321 VWA3AA6NCI4 1184 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 RSPH10B2B2RC85 870 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 RSPH10BP0C881 870 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 CSF2RAP15509 400 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 TMOD1P28289 359 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 IL17AQ16552 155 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 ZNF618Q5T7W0 954 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 FOXD4L5Q5VV16 416 aaPredicted RBP25.27■■□□□ 1.64
SKP1-206ENST00000519321 ATL3Q6DD88 541 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 CHRDL2Q6WN34 429 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 CATSPER3Q86XQ3 398 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 DNAJB3Q8WWF6 145 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 FOXD4L4Q8WXT5 416 aaPredicted RBP25.27■■□□□ 1.64
SKP1-206ENST00000519321 IL23AQ9NPF7 189 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 CYP26B1Q9NR63 512 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 ANKEF1Q9NU02 776 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 TANC1Q9C0D5 1861 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 CEP290O15078 2479 aa25.27■■□□□ 1.64
SKP1-206ENST00000519321 BRD1O95696 1058 aa25.26■■□□□ 1.63
SKP1-206ENST00000519321 SPATA31C1P0DKV0 1188 aa25.26■■□□□ 1.63
SKP1-206ENST00000519321 CCT6AP40227 531 aaKnown RBP25.26■■□□□ 1.63
SKP1-206ENST00000519321 PKP1Q13835 747 aa25.26■■□□□ 1.63
SKP1-206ENST00000519321 FAM26DQ5JW98 314 aa25.26■■□□□ 1.63
SKP1-206ENST00000519321 IER5Q5VY09 327 aa25.26■■□□□ 1.63
SKP1-206ENST00000519321 ZNF710Q8N1W2 664 aa25.26■■□□□ 1.63
SKP1-206ENST00000519321 METTL13Q8N6R0 699 aa25.26■■□□□ 1.63
SKP1-206ENST00000519321 SNX29Q8TEQ0 813 aa25.26■■□□□ 1.63
SKP1-206ENST00000519321 SCLYQ96I15 445 aa25.26■■□□□ 1.63
SKP1-206ENST00000519321 CEP170P1Q96L14 293 aa25.26■■□□□ 1.63
SKP1-206ENST00000519321 CCDC43Q96MW1 224 aaKnown RBP25.26■■□□□ 1.63
SKP1-206ENST00000519321 NACC1Q96RE7 527 aa25.26■■□□□ 1.63
SKP1-206ENST00000519321 USP28Q96RU2 1077 aa25.26■■□□□ 1.63
SKP1-206ENST00000519321 M0QZ92 97 aa25.25■■□□□ 1.63
SKP1-206ENST00000519321 MED24O75448 989 aa25.25■■□□□ 1.63
SKP1-206ENST00000519321 PTPAQ15257 358 aa25.25■■□□□ 1.63
SKP1-206ENST00000519321 PSRC1Q6PGN9 363 aaPredicted RBP25.25■■□□□ 1.63
SKP1-206ENST00000519321 FAM49AQ9H0Q0 323 aaPredicted RBP25.25■■□□□ 1.63
SKP1-206ENST00000519321 MYH15Q9Y2K3 1946 aa25.24■■□□□ 1.63
SKP1-206ENST00000519321 A0A1W2PPC1 479 aa25.24■■□□□ 1.63
SKP1-206ENST00000519321 SLC26A4O43511 780 aa25.24■■□□□ 1.63
SKP1-206ENST00000519321 MAFO75444 373 aaPredicted RBP25.24■■□□□ 1.63
SKP1-206ENST00000519321 LONP1P36776 959 aaKnown RBP25.24■■□□□ 1.63
SKP1-206ENST00000519321 RFC5P40937 340 aa25.24■■□□□ 1.63
SKP1-206ENST00000519321 NASPP49321 788 aaPredicted RBP25.24■■□□□ 1.63
SKP1-206ENST00000519321 MRPS6P82932 125 aaKnown RBP25.24■■□□□ 1.63
SKP1-206ENST00000519321 CEBPZQ03701 1054 aaKnown RBP25.24■■□□□ 1.63
SKP1-206ENST00000519321 SLC39A14Q15043 492 aa25.24■■□□□ 1.63
SKP1-206ENST00000519321 XKR9Q5GH70 373 aa25.24■■□□□ 1.63
SKP1-206ENST00000519321 EFCAB12Q6NXP0 572 aa25.24■■□□□ 1.63
SKP1-206ENST00000519321 KCTD17Q8N5Z5 321 aa25.24■■□□□ 1.63
SKP1-206ENST00000519321 MAP7D2Q96T17 732 aa25.24■■□□□ 1.63
SKP1-206ENST00000519321 FTOQ9C0B1 505 aaKnown RBP eCLIP25.24■■□□□ 1.63
SKP1-206ENST00000519321 PRO3102Q9H379 93 aa25.24■■□□□ 1.63
SKP1-206ENST00000519321 ATP6V1DQ9Y5K8 247 aa25.24■■□□□ 1.63
SKP1-206ENST00000519321 KDM3AQ9Y4C1 1321 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 TMEM150BA6NC51 233 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 CTSHP09668 335 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 DNM2P50570 870 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 STK38Q15208 465 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 PLA2G4FQ68DD2 849 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 TRAF7Q6Q0C0 670 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 KIAA0319LQ8IZA0 1049 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 SLC7A3Q8WY07 619 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 ZBTB10Q96DT7 871 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 CEP89Q96ST8 783 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 PCDH10Q9P2E7 1040 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 CFAP45Q9UL16 551 aa25.23■■□□□ 1.63
SKP1-206ENST00000519321 IGKV6-21A0A0C4DH24 114 aa25.22■■□□□ 1.63
SKP1-206ENST00000519321 GAS2O43903 313 aaKnown RBP25.22■■□□□ 1.63
SKP1-206ENST00000519321 POLGP54098 1239 aaPredicted RBP25.22■■□□□ 1.63
SKP1-206ENST00000519321 NPEPPSP55786 919 aa25.22■■□□□ 1.63
SKP1-206ENST00000519321 NUCB2P80303 420 aa25.22■■□□□ 1.63
SKP1-206ENST00000519321 CDC42EP1Q00587 391 aa25.22■■□□□ 1.63
SKP1-206ENST00000519321 SUGCTQ9HAC7 445 aa25.22■■□□□ 1.63
SKP1-206ENST00000519321 DBR1Q9UK59 544 aaKnown RBP25.22■■□□□ 1.63
SKP1-206ENST00000519321 SRPRBQ9Y5M8 271 aaKnown RBP25.22■■□□□ 1.63
SKP1-206ENST00000519321 YEATS4O95619 227 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 CXCL10P02778 98 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 ACTN1P12814 892 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 POTEGQ6S5H5 508 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 DEFB128Q7Z7B8 93 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 TDHQ8IZJ6 230 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 LINC01465Q8N7H1 131 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 PIGOQ8TEQ8 1089 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 SH2D3AQ9BRG2 576 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 NT5C3AQ9H0P0 336 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 MTIF3Q9H2K0 278 aaKnown RBP25.21■■□□□ 1.63
SKP1-206ENST00000519321 COLQQ9Y215 455 aaPredicted RBP25.21■■□□□ 1.63
SKP1-206ENST00000519321 TRPV2Q9Y5S1 764 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 CDY2AQ9Y6F7 541 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 SQORQ9Y6N5 450 aa25.21■■□□□ 1.63
SKP1-206ENST00000519321 PP2D1A8MPX8 630 aa25.2■■□□□ 1.62
SKP1-206ENST00000519321 ZBTB39O15060 712 aa25.2■■□□□ 1.62
SKP1-206ENST00000519321 DGAT1O75907 488 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms