RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 TMEFF1Q8IYR6 380 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 CNTD1Q8N815 330 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 WDR48Q8TAF3 677 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 STAG1Q8WVM7 1258 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 RTF1Q92541 710 aaKnown RBP6.13□□□□□ -1.43
SQLE-202ENST00000518604 ACAP3Q96P50 834 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 FMNL2Q96PY5 1086 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 AMNQ9BXJ7 453 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 UCKL1Q9NWZ5 548 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 PMF1-BGLAPU3KQ54 211 aa6.13□□□□□ -1.43
SQLE-202ENST00000518604 FBXO21O94952 628 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 TSPAN15O95858 294 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 PRLP01236 227 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 ITKQ08881 620 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 MTMR1Q13613 665 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 FAM50AQ14320 339 aaKnown RBP6.12□□□□□ -1.43
SQLE-202ENST00000518604 STILQ15468 1287 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 SYDE2Q5VT97 1194 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 CNKSR3Q6P9H4 555 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 ATG14Q6ZNE5 492 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 FAM129CQ86XR2 697 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 ERCC4Q92889 916 aaPredicted RBP6.12□□□□□ -1.43
SQLE-202ENST00000518604 ZNF496Q96IT1 587 aaPredicted RBP6.12□□□□□ -1.43
SQLE-202ENST00000518604 TUBGCP5Q96RT8 1024 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 RBPJLQ9UBG7 517 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 MSRAQ9UJ68 235 aa6.12□□□□□ -1.43
SQLE-202ENST00000518604 CNOT6Q9ULM6 557 aaKnown RBP6.12□□□□□ -1.43
SQLE-202ENST00000518604 RFXAPO00287 272 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 KDM1AO60341 852 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 KATNA1O75449 491 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 KRT1P04264 644 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 APEX1P27695 318 aaKnown RBP6.11□□□□□ -1.43
SQLE-202ENST00000518604 MC4RP32245 332 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 LIMS1P48059 325 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 BCAR1P56945 870 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 ERVK-21P61565 698 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 SLC6A3Q01959 620 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 ZNF385BQ569K4 471 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 SLFN12LQ6IEE8 588 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 OGFOD2Q6N063 350 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 KANSL1Q7Z3B3 1105 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 COG1Q8WTW3 980 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 ZBTB8AQ96BR9 441 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 NOX5Q96PH1 765 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 OR10A5Q9H207 317 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 METTL14Q9HCE5 456 aaKnown RBP6.11□□□□□ -1.43
SQLE-202ENST00000518604 CD320Q9NPF0 282 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 TOPORSQ9NS56 1045 aaPredicted RBP6.11□□□□□ -1.43
SQLE-202ENST00000518604 KCND1Q9NSA2 647 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 ZFP69BQ9UJL9 534 aa6.11□□□□□ -1.43
SQLE-202ENST00000518604 SMG5Q9UPR3 1016 aaKnown RBP6.11□□□□□ -1.43
SQLE-202ENST00000518604 WASHC2AQ641Q2 1341 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 PRPF6O94906 941 aaKnown RBP6.1□□□□□ -1.43
SQLE-202ENST00000518604 THBS2P35442 1172 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 ADCY2Q08462 1091 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 NFATC3Q12968 1075 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 KLF1Q13351 362 aaPredicted RBP6.1□□□□□ -1.43
SQLE-202ENST00000518604 MOGSQ13724 837 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 KIAA1841Q6NSI8 718 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 TTLL7Q6ZT98 887 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 FNIP1Q8TF40 1166 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 LMBR1Q8WVP7 490 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 RSAD2Q8WXG1 361 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 RPGRQ92834 1020 aaKnown RBP6.1□□□□□ -1.43
SQLE-202ENST00000518604 ASPSCR1Q9BZE9 553 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 TRIM8Q9BZR9 551 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 IRF2BPLQ9H1B7 796 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 VTA1Q9NP79 307 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 FBXO10Q9UK96 956 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 KCTD3Q9Y597 815 aa6.1□□□□□ -1.43
SQLE-202ENST00000518604 GOLGA8AA7E2F4 631 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 GOLGA8BA8MQT2 603 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 IL18BPO95998 194 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 CFBP00751 764 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 PLA2G1BP04054 148 aaKnown RBP6.09□□□□□ -1.43
SQLE-202ENST00000518604 C1QTNF9P0C862 333 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 RPL13P26373 211 aaKnown RBP6.09□□□□□ -1.43
SQLE-202ENST00000518604 FSCN1Q16658 493 aaKnown RBP6.09□□□□□ -1.43
SQLE-202ENST00000518604 INAVAQ3KP66 663 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 PLEKHG6Q3KR16 790 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 PRR31Q5SQ13 230 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 PRAMEF9Q5VWM5 478 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 SAPCD2Q86UD0 394 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 STK32CQ86UX6 486 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 CXorf67Q86X51 503 aaPredicted RBP6.09□□□□□ -1.43
SQLE-202ENST00000518604 TMEM151BQ8IW70 566 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 MTMR8Q96EF0 704 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 PWWP2AQ96N64 755 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 ORAI2Q96SN7 254 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 SYT3Q9BQG1 590 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 MYL10Q9BUA6 226 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 EPB41L4AQ9HCS5 686 aaPredicted RBP6.09□□□□□ -1.43
SQLE-202ENST00000518604 C14orf119Q9NWQ9 140 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 CROTQ9UKG9 612 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 TRHDEQ9UKU6 1024 aa6.09□□□□□ -1.43
SQLE-202ENST00000518604 ST20-MTHFSA0A0A6YYL1 179 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 KNG1P01042 644 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 PI3P19957 117 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 TXKP42681 527 aa6.08□□□□□ -1.44
SQLE-202ENST00000518604 RAP1GAPP47736 663 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms