RNA–Protein interactions for RNA: ENST00000517562.2

C8orf88-201, Transcript of chromosome 8 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C8orf88, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8orf88-201ENST00000517562 GPNMBQ14956 572 aa17.57■□□□□ 0.4
C8orf88-201ENST00000517562 XKR3Q5GH77 459 aa17.57■□□□□ 0.4
C8orf88-201ENST00000517562 SPECC1Q5M775 1068 aa17.57■□□□□ 0.4
C8orf88-201ENST00000517562 C16orf59Q7L2K0 433 aa17.57■□□□□ 0.4
C8orf88-201ENST00000517562 VWCEQ96DN2 955 aa17.57■□□□□ 0.4
C8orf88-201ENST00000517562 CLIC6Q96NY7 704 aa17.57■□□□□ 0.4
C8orf88-201ENST00000517562 GDF15Q99988 308 aa17.57■□□□□ 0.4
C8orf88-201ENST00000517562 UBE2OQ9C0C9 1292 aaKnown RBP17.57■□□□□ 0.4
C8orf88-201ENST00000517562 SUGCTQ9HAC7 445 aa17.57■□□□□ 0.4
C8orf88-201ENST00000517562 PCDHA2Q9Y5H9 948 aa17.57■□□□□ 0.4
C8orf88-201ENST00000517562 ARID2Q68CP9 1835 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 C22orf31O95567 290 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 CCT6AP40227 531 aaKnown RBP17.56■□□□□ 0.4
C8orf88-201ENST00000517562 CLCN3P51790 818 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 BFSP2Q13515 415 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 TARBP2Q15633 366 aaKnown RBP17.56■□□□□ 0.4
C8orf88-201ENST00000517562 XKR9Q5GH70 373 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 EFCAB12Q6NXP0 572 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 TRAF7Q6Q0C0 670 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 POTEGQ6S5H5 508 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 IGSF22Q8N9C0 903 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 FAM167AQ96KS9 214 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 CEP89Q96ST8 783 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 MMTAG2Q9BU76 263 aaKnown RBP17.56■□□□□ 0.4
C8orf88-201ENST00000517562 NIFKQ9BYG3 293 aaKnown RBP17.56■□□□□ 0.4
C8orf88-201ENST00000517562 ZSWIM4Q9H7M6 989 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 CDHR5Q9HBB8 845 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 TSHZ2Q9NRE2 1034 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 SIP14410 1827 aa17.56■□□□□ 0.4
C8orf88-201ENST00000517562 LAD1O00515 517 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 BRD1O95696 1058 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 CHRNA1P02708 482 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 SELPP16109 830 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 YWHABP31946 246 aaKnown RBP17.55■□□□□ 0.4
C8orf88-201ENST00000517562 PRPHP41219 470 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 DNM1Q05193 864 aaKnown RBP17.55■□□□□ 0.4
C8orf88-201ENST00000517562 FPGSQ05932 587 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 DRP2Q13474 957 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 PDIA5Q14554 519 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 MBTPS1Q14703 1052 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 TCTN1Q2MV58 587 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 C9orf50Q5SZB4 431 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 PRPF38BQ5VTL8 546 aaKnown RBP17.55■□□□□ 0.4
C8orf88-201ENST00000517562 USP49Q70CQ1 688 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 LRRC8DQ7L1W4 858 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 C4orf19Q8IY42 314 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 KIAA0319LQ8IZA0 1049 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 TMEM199Q8N511 208 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 CEP170P1Q96L14 293 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 POLD4Q9HCU8 107 aa17.55■□□□□ 0.4
C8orf88-201ENST00000517562 RSPH10B2B2RC85 870 aa17.54■□□□□ 0.4
C8orf88-201ENST00000517562 VTNP04004 478 aa17.54■□□□□ 0.4
C8orf88-201ENST00000517562 RSPH10BP0C881 870 aa17.54■□□□□ 0.4
C8orf88-201ENST00000517562 MKRN4PQ13434 485 aaPredicted RBP17.54■□□□□ 0.4
C8orf88-201ENST00000517562 SHHQ15465 462 aa17.54■□□□□ 0.4
C8orf88-201ENST00000517562 ZNF365Q70YC5 407 aa17.54■□□□□ 0.4
C8orf88-201ENST00000517562 SNX29Q8TEQ0 813 aa17.54■□□□□ 0.4
C8orf88-201ENST00000517562 TNPO1Q92973 898 aaKnown RBP17.54■□□□□ 0.4
C8orf88-201ENST00000517562 CYP26B1Q9NR63 512 aa17.54■□□□□ 0.4
C8orf88-201ENST00000517562 KIAA1024Q9UPX6 916 aa17.54■□□□□ 0.4
C8orf88-201ENST00000517562 GINS2Q9Y248 185 aa17.54■□□□□ 0.4
C8orf88-201ENST00000517562 TRIOBPQ9H2D6 2365 aa17.54■□□□□ 0.4
C8orf88-201ENST00000517562 TANC1Q9C0D5 1861 aa17.54■□□□□ 0.4
C8orf88-201ENST00000517562 COL1A2P08123 1366 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 NBNO60934 754 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 RPA1P27694 616 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 ANP32AP39687 249 aaKnown RBP17.53■□□□□ 0.4
C8orf88-201ENST00000517562 TBC1D8BQ0IIM8 1120 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 SLC39A14Q15043 492 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 STK38Q15208 465 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 TPRNQ4KMQ1 711 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 ARL6IP4Q66PJ3 421 aaKnown RBP17.53■□□□□ 0.4
C8orf88-201ENST00000517562 MAEAQ7L5Y9 396 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 CCDC155Q8N6L0 562 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 ERMNQ8TAM6 284 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 CAGE1Q8TC20 777 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 ZNF396Q96N95 335 aaPredicted RBP17.53■□□□□ 0.4
C8orf88-201ENST00000517562 PNMA5Q96PV4 448 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.53■□□□□ 0.4
C8orf88-201ENST00000517562 POLR3CQ9BUI4 534 aaPredicted RBP17.53■□□□□ 0.4
C8orf88-201ENST00000517562 CSRNP2Q9H175 543 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 TUFT1Q9NNX1 390 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 DDX19AQ9NUU7 478 aaKnown RBP17.53■□□□□ 0.4
C8orf88-201ENST00000517562 FBXO2Q9UK22 296 aaPredicted RBP17.53■□□□□ 0.4
C8orf88-201ENST00000517562 CEP131Q9UPN4 1083 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 RBM19Q9Y4C8 960 aaKnown RBP17.53■□□□□ 0.4
C8orf88-201ENST00000517562 CDY2AQ9Y6F7 541 aa17.53■□□□□ 0.4
C8orf88-201ENST00000517562 E9PMD0 336 aa17.52■□□□□ 0.4
C8orf88-201ENST00000517562 PITPNM1O00562 1244 aa17.52■□□□□ 0.4
C8orf88-201ENST00000517562 TMEM240Q5SV17 173 aa17.52■□□□□ 0.4
C8orf88-201ENST00000517562 OTUD6AQ7L8S5 288 aa17.52■□□□□ 0.4
C8orf88-201ENST00000517562 OTOP2Q7RTS6 562 aa17.52■□□□□ 0.4
C8orf88-201ENST00000517562 KCNK18Q7Z418 384 aa17.52■□□□□ 0.4
C8orf88-201ENST00000517562 KSR1Q8IVT5 923 aa17.52■□□□□ 0.4
C8orf88-201ENST00000517562 TMEM143Q96AN5 459 aa17.52■□□□□ 0.4
C8orf88-201ENST00000517562 EPSTI1Q96J88 318 aa17.52■□□□□ 0.4
C8orf88-201ENST00000517562 PANK2Q9BZ23 570 aa17.52■□□□□ 0.4
C8orf88-201ENST00000517562 IL23AQ9NPF7 189 aa17.52■□□□□ 0.4
C8orf88-201ENST00000517562 SMIM35A0A1B0GVV1 85 aa17.51■□□□□ 0.39
C8orf88-201ENST00000517562 MAGEB2O15479 319 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms