RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 CC2D1AQ6P1N0 951 aaPredicted RBP3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 CFAP161Q6P656 301 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 ARHGAP36Q6ZRI8 547 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 CXorf67Q86X51 503 aaPredicted RBP3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 FBXO11Q86XK2 927 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 CPNE8Q86YQ8 564 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 ZNF655Q8N720 491 aaPredicted RBP3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 DAGLBQ8NCG7 672 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 NAXEQ8NCW5 288 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 NGDNQ8NEJ9 315 aaKnown RBP3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 ZSCAN18Q8TBC5 510 aaPredicted RBP3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 ENOX1Q8TC92 643 aaKnown RBP3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 LRTOMTQ8WZ04 291 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 RTF1Q92541 710 aaKnown RBP3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 DLG3Q92796 817 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 TBC1D20Q96BZ9 403 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 TCTN2Q96GX1 697 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 ZNF496Q96IT1 587 aaPredicted RBP3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 CGRRF1Q99675 332 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 JAM3Q9BX67 310 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 HDAC8Q9BY41 377 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 ANO3Q9BYT9 981 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 ACSS3Q9H6R3 686 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 CERS4Q9HA82 394 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 LGR6Q9HBX8 967 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 DMRT3Q9NQL9 472 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 CLDND1Q9NY35 253 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 CLIC5Q9NZA1 410 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 POLG2Q9UHN1 485 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 KCNG1Q9UIX4 513 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 MSRAQ9UJ68 235 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 EDARQ9UNE0 448 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 RABGAP1Q9Y3P9 1069 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 DAGLAQ9Y4D2 1042 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 TIMM13Q9Y5L4 95 aaPredicted RBP3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 B3GALT1Q9Y5Z6 326 aa3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 LRRFIP2Q9Y608 721 aaKnown RBP3.08□□□□□ -1.92
SCARNA3-201ENST00000517097 TRBV23OR9-2A0A075B6M9 112 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 A0A1B0GVC2 190 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 SCDO00767 359 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 KPNA5O15131 536 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 NKRFO15226 690 aaKnown RBP eCLIP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 MGEA5O60502 916 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 CBX7O95931 251 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 PYGLP06737 847 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 GSTM1P09488 218 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 CLEC2LP0C7M8 214 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 GNAT1P11488 350 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 COL6A2P12110 1019 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 MTHFD2P13995 350 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 RXRGP48443 463 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 CEBPAP49715 358 aaPredicted RBP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 SLC5A3P53794 718 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 SLC16A1P53985 500 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 MANFP55145 182 aaKnown RBP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 RPL11P62913 178 aaKnown RBP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 MRPS9P82933 396 aaKnown RBP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 ICA1Q05084 483 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 PPFIA1Q13136 1202 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 MOGSQ13724 837 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 POLD3Q15054 466 aaPredicted RBP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 ANO4Q32M45 955 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 CCDC38Q502W7 563 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 FAM209BQ5JX69 171 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 SFRP5Q5T4F7 317 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 INTS11Q5TA45 600 aaKnown RBP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 IZUMO3Q5VZ72 239 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 ICE2Q659A1 982 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 CPZQ66K79 652 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 CDPF1Q6NVV7 123 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 FDX2Q6P4F2 183 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 CYP26C1Q6V0L0 522 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 C1orf122Q6ZSJ8 110 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 RSRC2Q7L4I2 434 aaKnown RBP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 MAEAQ7L5Y9 396 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 NLRP10Q86W26 655 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 COL23A1Q86Y22 540 aaPredicted RBP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 ANKRD18AQ8IVF6 992 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 TOP6BLQ8N6T0 577 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 NSUN6Q8TEA1 469 aaKnown RBP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 SH3RF2Q8TEC5 729 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 SNRNP27Q8WVK2 155 aaKnown RBP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 PHKBQ93100 1093 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 ARL8AQ96BM9 186 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 ERP27Q96DN0 273 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 TRIM11Q96F44 468 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 COX4I2Q96KJ9 171 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 C16orf92Q96LL3 132 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 BTBD1Q9H0C5 482 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 SEMA4AQ9H3S1 761 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 USP36Q9P275 1121 aaKnown RBP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 EVLQ9UI08 416 aaPredicted RBP3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 HDAC9Q9UKV0 1011 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 ASAP1Q9ULH1 1129 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 TPCN1Q9ULQ1 816 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 ZNF281Q9Y2X9 895 aa3.07□□□□□ -1.92
SCARNA3-201ENST00000517097 C7orf72A4D263 438 aa3.06□□□□□ -1.92
SCARNA3-201ENST00000517097 CCDC154A6NI56 674 aa3.06□□□□□ -1.92
SCARNA3-201ENST00000517097 WTIPA6NIX2 430 aaPredicted RBP3.06□□□□□ -1.92
SCARNA3-201ENST00000517097 H7BY64 318 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms