RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 NLRP2Q9NX02 1062 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 ZNF652Q9Y2D9 606 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 MAST3O60307 1309 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 AOX1Q06278 1338 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 WDR81Q562E7 1941 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 SNED1Q8TER0 1413 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 GOLGA6L6A8MZA4 724 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 B4E1Z4 1266 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 C22orf46C9J442 243 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 SOCS5O75159 536 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 THBDP07204 575 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 CD3EP07766 207 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 EGR2P11161 476 aaPredicted RBP0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 RHCEP18577 417 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 SFPQP23246 707 aaKnown RBP eCLIP0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 GSTT1P30711 240 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 STAT3P40763 770 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 ADAM15Q13444 863 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 ACAP1Q15027 740 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 NAIF1Q69YI7 327 aaPredicted RBP0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 RCSD1Q6JBY9 416 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 ADHFE1Q8IWW8 467 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 TMEM192Q8IY95 271 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 ELOA2Q8IYF1 753 aaPredicted RBP0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 ZBTB38Q8NAP3 1195 aaPredicted RBP0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 WBP2Q969T9 261 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 ARMC5Q96C12 935 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 FAM129BQ96TA1 746 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 LCE3DQ9BYE3 92 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 NIF3L1Q9GZT8 377 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 CROCCQ5TZA2 2017 aa0.29□□□□□ -2.36
RNU6-542P-201ENST00000516405 A0A1W2PRX2 142 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 UNC119BA6NIH7 251 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 FAM90A8PA6NJQ4 464 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 GPR182O15218 404 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 CLEC3AO75596 197 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 HTR3BO95264 441 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 SERPINB2P05120 415 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 FAM90A13PP0C7W8 464 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 FAM90A24PP0C7X0 464 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 TCEA1P23193 301 aaKnown RBP0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 FPR2P25090 351 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 RPS26P62854 115 aaKnown RBP0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 EXOSC10Q01780 885 aaKnown RBP0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 TP53BP2Q13625 1128 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 ELOAQ14241 798 aaKnown RBP0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 RABEP1Q15276 862 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 LLGL1Q15334 1064 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 LARP7Q4G0J3 582 aaKnown RBP eCLIP0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 ARSHQ5FYA8 562 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 TMEM164Q5U3C3 297 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 ABHD17BQ5VST6 288 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 EEF1DP3Q658K8 133 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 TRIM68Q6AZZ1 485 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 SUSD1Q6UWL2 747 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 ZNF782Q6ZMW2 699 aaPredicted RBP0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 NEK8Q86SG6 692 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 NR2C2APQ86WQ0 139 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 JARID2Q92833 1246 aaPredicted RBP0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 BRF1Q92994 677 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 PDLIM2Q96JY6 352 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 ZDHHC5Q9C0B5 715 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 MKRN2Q9H000 416 aaKnown RBP0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 SLC17A6Q9P2U8 582 aa0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 POLR3KQ9Y2Y1 108 aaPredicted RBP0.28□□□□□ -2.36
RNU6-542P-201ENST00000516405 SCN5AQ14524 2016 aa0.28□□□□□ -2.37
RNU6-542P-201ENST00000516405 AHNAKQ09666 5890 aaKnown RBP0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 FAM90A10PA6NDY2 464 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 NPHS1O60500 1241 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 NCR1O76036 304 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 CAMTA2O94983 1202 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 NDUFA10O95299 355 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 LATS1O95835 1130 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 ATP2B4P23634 1241 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 MRE11P49959 708 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 KCNQ1P51787 676 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 ZNF445P59923 1031 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 PFKPQ01813 784 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 TFF2Q03403 129 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 RAD51AP2Q09MP3 1159 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 LRRC41Q15345 812 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 BEAN1Q3B7T3 259 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 NAALADL2Q58DX5 795 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 CFAP70Q5T0N1 1121 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 AGMOQ6ZNB7 445 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 C9orf47Q6ZRZ4 202 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 YTHDF3Q7Z739 585 aaKnown RBP0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 FILIP1Q7Z7B0 1213 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 RIOX2Q8IUF8 465 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 MB21D1Q8N884 522 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 ADAM2Q99965 735 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 SLC46A2Q9BY10 475 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 EGLN1Q9GZT9 426 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 OR10A2Q9H208 303 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 NRIP3Q9NQ35 241 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 SFMBT1Q9UHJ3 866 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 AFG3L2Q9Y4W6 797 aa0.27□□□□□ -2.37
RNU6-542P-201ENST00000516405 IGKV3D-20A0A0C4DH25 116 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 ARID3CA6NKF2 412 aa0.26□□□□□ -2.37
RNU6-542P-201ENST00000516405 HGSO14964 777 aaPredicted RBP0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms