RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 MED24O75448 989 aa13.31□□□□□ -0.28
SNF8-215ENST00000515572 CCT6AP40227 531 aaKnown RBP13.31□□□□□ -0.28
SNF8-215ENST00000515572 KRT85P78386 507 aa13.31□□□□□ -0.28
SNF8-215ENST00000515572 DNM1Q05193 864 aaKnown RBP13.31□□□□□ -0.28
SNF8-215ENST00000515572 TBC1D8BQ0IIM8 1120 aa13.31□□□□□ -0.28
SNF8-215ENST00000515572 TARBP2Q15633 366 aaKnown RBP13.31□□□□□ -0.28
SNF8-215ENST00000515572 MTHFD1LQ6UB35 978 aa13.31□□□□□ -0.28
SNF8-215ENST00000515572 TRMT1LQ7Z2T5 733 aaKnown RBP13.31□□□□□ -0.28
SNF8-215ENST00000515572 RPAINQ86UA6 219 aa13.31□□□□□ -0.28
SNF8-215ENST00000515572 KRI1Q8N9T8 703 aaKnown RBP13.31□□□□□ -0.28
SNF8-215ENST00000515572 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
SNF8-215ENST00000515572 KCNG4Q8TDN1 519 aa13.31□□□□□ -0.28
SNF8-215ENST00000515572 DHX38Q92620 1227 aaKnown RBP13.31□□□□□ -0.28
SNF8-215ENST00000515572 NACC1Q96RE7 527 aa13.31□□□□□ -0.28
SNF8-215ENST00000515572 LBHD1Q9BQE6 289 aaPredicted RBP13.31□□□□□ -0.28
SNF8-215ENST00000515572 JPH2Q9BR39 696 aaPredicted RBP13.31□□□□□ -0.28
SNF8-215ENST00000515572 FBXO2Q9UK22 296 aaPredicted RBP13.31□□□□□ -0.28
SNF8-215ENST00000515572 ZMYND8Q9ULU4 1186 aaPredicted RBP13.31□□□□□ -0.28
SNF8-215ENST00000515572 MKI67P46013 3256 aaKnown RBP13.3□□□□□ -0.28
SNF8-215ENST00000515572 SMIM35A0A1B0GVV1 85 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 H0YGN5 161 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 SPTLC2O15270 562 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 PARNO95453 639 aaKnown RBP13.3□□□□□ -0.28
SNF8-215ENST00000515572 C22orf31O95567 290 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 SYN1P17600 705 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 MARCKSP29966 332 aaPredicted RBP13.3□□□□□ -0.28
SNF8-215ENST00000515572 RFC5P40937 340 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 TRIM71Q2Q1W2 868 aaKnown RBP13.3□□□□□ -0.28
SNF8-215ENST00000515572 FOXD4L6Q3SYB3 417 aaPredicted RBP13.3□□□□□ -0.28
SNF8-215ENST00000515572 MTERF2Q49AM1 385 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 PLA2G4FQ68DD2 849 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 MFSD5Q6N075 450 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 FOXD4L3Q6VB84 417 aaPredicted RBP13.3□□□□□ -0.28
SNF8-215ENST00000515572 TMEM199Q8N511 208 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 TRAPPC12Q8WVT3 735 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 CEP170P1Q96L14 293 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 CCDC43Q96MW1 224 aaKnown RBP13.3□□□□□ -0.28
SNF8-215ENST00000515572 PPP1R12CQ9BZL4 782 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 NT5C3AQ9H0P0 336 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 CYP26B1Q9NR63 512 aa13.3□□□□□ -0.28
SNF8-215ENST00000515572 DBR1Q9UK59 544 aaKnown RBP13.3□□□□□ -0.28
SNF8-215ENST00000515572 PP2D1A8MPX8 630 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 GAS2O43903 313 aaKnown RBP13.29□□□□□ -0.28
SNF8-215ENST00000515572 CKBP12277 381 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 TMOD1P28289 359 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 RFC2P35250 354 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 TXLNAP40222 546 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 THPOP40225 353 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 UBA7P41226 1012 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 XKR9Q5GH70 373 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 HYIQ5T013 277 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 POTEGQ6S5H5 508 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 LRRC8DQ7L1W4 858 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 ZNF710Q8N1W2 664 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 NME8Q8N427 588 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 ZNF579Q8NAF0 562 aaKnown RBP13.29□□□□□ -0.28
SNF8-215ENST00000515572 SLC7A3Q8WY07 619 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 IPO9Q96P70 1041 aaKnown RBP13.29□□□□□ -0.28
SNF8-215ENST00000515572 MMTAG2Q9BU76 263 aaKnown RBP13.29□□□□□ -0.28
SNF8-215ENST00000515572 CCSER1Q9C0I3 900 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 CSRNP2Q9H175 543 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 KIAA1024Q9UPX6 916 aa13.29□□□□□ -0.28
SNF8-215ENST00000515572 SIP14410 1827 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 TMEM150BA6NC51 233 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 CUTAO60888 179 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 MAFO75444 373 aaPredicted RBP13.28□□□□□ -0.28
SNF8-215ENST00000515572 IQCF3P0C7M6 154 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 SELPP16109 830 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 NCLP19338 710 aaKnown RBP13.28□□□□□ -0.28
SNF8-215ENST00000515572 CDC25AP30304 524 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 CYP2C18P33260 490 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 RARRES1P49788 294 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 DNM2P50570 870 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 IER5Q5VY09 327 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 EFCAB12Q6NXP0 572 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 RUFY4Q6ZNE9 571 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 CABP7Q86V35 215 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 METTL13Q8N6R0 699 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 DNAJB3Q8WWF6 145 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 BADQ92934 168 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 WNT8BQ93098 351 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 CALML4Q96GE6 196 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 CDK5RAP3Q96JB5 506 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 CEP89Q96ST8 783 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 SCAND2PQ9GZW5 306 aaPredicted RBP13.28□□□□□ -0.28
SNF8-215ENST00000515572 WNT8AQ9H1J5 351 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 DDX19AQ9NUU7 478 aaKnown RBP13.28□□□□□ -0.28
SNF8-215ENST00000515572 CHMP5Q9NZZ3 219 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 RCOR1Q9UKL0 485 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 UMODL1Q5DID0 1318 aa13.28□□□□□ -0.28
SNF8-215ENST00000515572 SCN5AQ14524 2016 aa13.27□□□□□ -0.28
SNF8-215ENST00000515572 IGKV6-21A0A0C4DH24 114 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 RSPH10B2B2RC85 870 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 M0QZ92 97 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 DGAT1O75907 488 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 RSPH10BP0C881 870 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 ITGB8P26012 769 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 ME1P48163 572 aa13.27□□□□□ -0.29
SNF8-215ENST00000515572 POLGP54098 1239 aaPredicted RBP13.27□□□□□ -0.29
SNF8-215ENST00000515572 CCL23P55773 120 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms