RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	TOB2	Q14106	344 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	ODR4	Q5SWX8	454 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	SWSAP1	Q6NVH7	229 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	CKAP2L	Q8IYA6	745 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	PLVAP	Q9BX97	442 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	C22orf23	Q9BZE7	217 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	TM6SF1	Q9BZW5	370 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	CEP131	Q9UPN4	1083 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	PCDHA10	Q9Y5I2	948 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	CYP46A1	Q9Y6A2	500 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	ATG2A	Q2TAZ0	1938 aa		13.97	□□□□□ -0.17
CDK18-223	ENST00000515514	MMP1	P03956	469 aa		13.96	□□□□□ -0.17
CDK18-223	ENST00000515514	ATP4A	P20648	1035 aa		13.96	□□□□□ -0.17
CDK18-223	ENST00000515514	CCT2	P78371	535 aa	Known RBP	13.96	□□□□□ -0.17
CDK18-223	ENST00000515514	PUS10	Q3MIT2	529 aa	Known RBP	13.96	□□□□□ -0.17
CDK18-223	ENST00000515514	TCEAL5	Q5H9L2	206 aa		13.96	□□□□□ -0.17
CDK18-223	ENST00000515514	KIAA0319L	Q8IZA0	1049 aa		13.96	□□□□□ -0.17
CDK18-223	ENST00000515514	P2RX5	Q93086	422 aa		13.96	□□□□□ -0.17
CDK18-223	ENST00000515514	PABPC5	Q96DU9	382 aa	Known RBP	13.96	□□□□□ -0.17
CDK18-223	ENST00000515514	C1QTNF1	Q9BXJ1	281 aa		13.96	□□□□□ -0.17
CDK18-223	ENST00000515514	ERVK-5	Q9HDB9	667 aa		13.96	□□□□□ -0.17
CDK18-223	ENST00000515514	RNF216	Q9NWF9	866 aa	Predicted RBP	13.96	□□□□□ -0.17
CDK18-223	ENST00000515514	KIAA1671	Q9BY89	1806 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	CPLX1	O14810	134 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	NCK2	O43639	380 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	PPFIA3	O75145	1194 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	RPS6KA5	O75582	802 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	DEXI	O95424	95 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	SARS	P49591	514 aa	Known RBP	13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	USP11	P51784	963 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	NLRP5	P59047	1200 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	TMEM266	Q2M3C6	531 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	NAALADL2	Q58DX5	795 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	CPLX2	Q6PUV4	134 aa	Known RBP	13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	DAGLB	Q8NCG7	672 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	NEK9	Q8TD19	979 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	TMEM40	Q8WWA1	233 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	ZNF274	Q96GC6	653 aa	Predicted RBP	13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	RIT2	Q99578	217 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	TMX1	Q9H3N1	280 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	C1orf112	Q9NSG2	853 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	GABBR1	Q9UBS5	961 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	GINS2	Q9Y248	185 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	SAMM50	Q9Y512	469 aa		13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	MRPL42	Q9Y6G3	142 aa	Known RBP	13.95	□□□□□ -0.18
CDK18-223	ENST00000515514	GPR182	O15218	404 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	GRM6	O15303	877 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	MSH4	O15457	936 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	MAGEB2	O15479	319 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	GAS7	O60861	476 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	NEFL	P07196	543 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	SFN	P31947	248 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	JAK3	P52333	1124 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	CRYBB1	P53674	252 aa	Predicted RBP	13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	PRKCE	Q02156	737 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	SSRP1	Q08945	709 aa	Known RBP	13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	NFX1	Q12986	1120 aa	Known RBP	13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	ZNF710	Q8N1W2	664 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	RDM1	Q8NG50	284 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	UIMC1	Q96RL1	719 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	UPF3B	Q9BZI7	483 aa	Known RBP	13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	DISC1	Q9NRI5	854 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	LRFN2	Q9ULH4	789 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	PCDHA4	Q9UN74	947 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	NOC2L	Q9Y3T9	749 aa	Known RBP	13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	LOXHD1	Q8IVV2	1947 aa		13.94	□□□□□ -0.18
CDK18-223	ENST00000515514	DENND3	A2RUS2	1198 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	EDIL3	O43854	480 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	MGEA5	O60502	916 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	OAT	P04181	439 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	COL9A1	P20849	921 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	KIZ	Q2M2Z5	673 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	PAN2	Q504Q3	1202 aa	Known RBP	13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	LRCH2	Q5VUJ6	765 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	GALNT17	Q6IS24	598 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	MOXD1	Q6UVY6	613 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	LINC01465	Q8N7H1	131 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	TBCK	Q8TEA7	893 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	SLC5A5	Q92911	643 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	MAP7D2	Q96T17	732 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	OSMR	Q99650	979 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	TEKT3	Q9BXF9	490 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	RGS18	Q9NS28	235 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	FAM50B	Q9Y247	325 aa		13.93	□□□□□ -0.18
CDK18-223	ENST00000515514	MYH9	P35579	1960 aa	Known RBP	13.92	□□□□□ -0.18
CDK18-223	ENST00000515514	GRXCR2	A6NFK2	248 aa		13.92	□□□□□ -0.18
CDK18-223	ENST00000515514		C9IYK1	514 aa		13.92	□□□□□ -0.18
CDK18-223	ENST00000515514		H3BQ06	376 aa	Predicted RBP	13.92	□□□□□ -0.18
CDK18-223	ENST00000515514		M0R2N6	131 aa		13.92	□□□□□ -0.18
CDK18-223	ENST00000515514	ZNF862	O60290	1169 aa		13.92	□□□□□ -0.18
CDK18-223	ENST00000515514	GPR32	O75388	356 aa		13.92	□□□□□ -0.18
CDK18-223	ENST00000515514	CDKL5	O76039	1030 aa		13.92	□□□□□ -0.18
CDK18-223	ENST00000515514	VTN	P04004	478 aa		13.92	□□□□□ -0.18
CDK18-223	ENST00000515514	IL9	P15248	144 aa		13.92	□□□□□ -0.18
CDK18-223	ENST00000515514	TMOD1	P28289	359 aa		13.92	□□□□□ -0.18
CDK18-223	ENST00000515514	CLCN3	P51790	818 aa		13.92	□□□□□ -0.18
CDK18-223	ENST00000515514	NPY5R	Q15761	445 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms