RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 UBXN1Q04323 297 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 PPP2R3AQ06190 1150 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 RBL2Q08999 1139 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 TBC1D8BQ0IIM8 1120 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 ALCAMQ13740 583 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 STXBP2Q15833 593 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 VWA3BQ502W6 1294 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 MIIPQ5JXC2 388 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 E4F1Q66K89 784 aaPredicted RBP11.28□□□□□ -0.6
SNF8-214ENST00000515174 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 STXBP4Q6ZWJ1 553 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 KCNN1Q92952 543 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 ERO1AQ96HE7 468 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 PRIMPOLQ96LW4 560 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 RUSC1Q9BVN2 902 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 TMEM106CQ9BVX2 250 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 STRA6Q9BX79 667 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 CFHR5Q9BXR6 569 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 SPATC1LQ9H0A9 340 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 ASCC2Q9H1I8 757 aaPredicted RBP11.28□□□□□ -0.6
SNF8-214ENST00000515174 ST6GALNAC4Q9H4F1 302 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 PARVGQ9HBI0 331 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 TAB2Q9NYJ8 693 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 BTBD7Q9P203 1132 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 TCEAL9Q9UHQ7 104 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 FAM184BQ9ULE4 1060 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 CAPN11Q9UMQ6 739 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 PCDHA10Q9Y5I2 948 aa11.28□□□□□ -0.6
SNF8-214ENST00000515174 CCL15-CCL14A0A0B4J2E2 113 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 NPHP3-ACAD11A0A0J9YXS1 232 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 CETN3O15182 167 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 ATP9AO75110 1047 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 ATG7O95352 703 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 GYPCP04921 128 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 MYCLP12524 364 aaPredicted RBP11.27□□□□□ -0.61
SNF8-214ENST00000515174 KCNA2P16389 499 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 EN2P19622 333 aaPredicted RBP11.27□□□□□ -0.61
SNF8-214ENST00000515174 RPL13P26373 211 aaKnown RBP11.27□□□□□ -0.61
SNF8-214ENST00000515174 MTIF2P46199 727 aaKnown RBP11.27□□□□□ -0.61
SNF8-214ENST00000515174 INHBEP58166 350 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 MCCD1P59942 119 aaPredicted RBP11.27□□□□□ -0.61
SNF8-214ENST00000515174 SNRPFP62306 86 aaKnown RBP11.27□□□□□ -0.61
SNF8-214ENST00000515174 HERVK_113P62684 666 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 IRX3P78415 501 aaPredicted RBP11.27□□□□□ -0.61
SNF8-214ENST00000515174 SNAPC2Q13487 334 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 CCL15Q16663 113 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 FKBP15Q5T1M5 1219 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 GPAT2Q6NUI2 795 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 ZNF720Q7Z2F6 126 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 FRMD5Q7Z6J6 570 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 SFR1Q86XK3 245 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 IFNL1Q8IU54 200 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 TMTC1Q8IUR5 882 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 FAM133AQ8N9E0 248 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 SHCBP1Q8NEM2 672 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 CD99L2Q8TCZ2 262 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 PIGOQ8TEQ8 1089 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 BRI3BPQ8WY22 251 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 UIMC1Q96RL1 719 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 FIZ1Q96SL8 496 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 NOC4LQ9BVI4 516 aaKnown RBP11.27□□□□□ -0.61
SNF8-214ENST00000515174 MOV10L1Q9BXT6 1211 aaKnown RBP11.27□□□□□ -0.61
SNF8-214ENST00000515174 TTYH3Q9C0H2 523 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 TYW1Q9NV66 732 aaKnown RBP11.27□□□□□ -0.61
SNF8-214ENST00000515174 CGNQ9P2M7 1197 aaKnown RBP11.27□□□□□ -0.61
SNF8-214ENST00000515174 WRAP73Q9P2S5 460 aaPredicted RBP11.27□□□□□ -0.61
SNF8-214ENST00000515174 KCNG1Q9UIX4 513 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 PCDHB13Q9Y5F0 798 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 WDR81Q562E7 1941 aa11.27□□□□□ -0.61
SNF8-214ENST00000515174 ARHGEF35A5YM69 484 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 ZSCAN12O43309 604 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 CHMP2AO43633 222 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 CALUO43852 315 aaPredicted RBP11.26□□□□□ -0.61
SNF8-214ENST00000515174 PEX10O60683 326 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 COBLO75128 1261 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 CNMDO75829 334 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 PPP1R37O75864 691 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 RGS20O76081 388 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 FAM13AO94988 1023 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 ZBTB48P10074 688 aaPredicted RBP11.26□□□□□ -0.61
SNF8-214ENST00000515174 SCP2P22307 547 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 HNRNPH3P31942 346 aaKnown RBP11.26□□□□□ -0.61
SNF8-214ENST00000515174 HOXD13P35453 343 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 RARRES1P49788 294 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 FXR1P51114 621 aaKnown RBP eCLIP11.26□□□□□ -0.61
SNF8-214ENST00000515174 CDK17Q00537 523 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 MAPK7Q13164 816 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 LRRC41Q15345 812 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 KCNV1Q6PIU1 500 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 PADI6Q6TGC4 694 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 OTUD6AQ7L8S5 288 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 TRIM59Q8IWR1 403 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 GLIS3Q8NEA6 775 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 OR8K1Q8NGG5 319 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 GOLGA5Q8TBA6 731 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 MS4A4AQ96JQ5 239 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 MPHOSPH6Q99547 160 aaKnown RBP11.26□□□□□ -0.61
SNF8-214ENST00000515174 DNAJC7Q99615 494 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 MKNK1Q9BUB5 465 aa11.26□□□□□ -0.61
SNF8-214ENST00000515174 NDST4Q9H3R1 872 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms