RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 RDM1Q8NG50 284 aa27.63■■■□□ 2.01
SNF8-213ENST00000514929 ETNPPLQ8TBG4 499 aa27.63■■■□□ 2.01
SNF8-213ENST00000514929 TGS1Q96RS0 853 aaKnown RBP27.63■■■□□ 2.01
SNF8-213ENST00000514929 NRBP2Q9NSY0 501 aa27.63■■■□□ 2.01
SNF8-213ENST00000514929 PRUNE2Q8WUY3 3088 aa27.63■■■□□ 2.01
SNF8-213ENST00000514929 C22orf31O95567 290 aa27.62■■■□□ 2.01
SNF8-213ENST00000514929 OATP04181 439 aa27.62■■■□□ 2.01
SNF8-213ENST00000514929 KRT2P35908 639 aa27.62■■■□□ 2.01
SNF8-213ENST00000514929 KIAA0319LQ8IZA0 1049 aa27.62■■■□□ 2.01
SNF8-213ENST00000514929 METTL13Q8N6R0 699 aa27.62■■■□□ 2.01
SNF8-213ENST00000514929 LIMCH1Q9UPQ0 1083 aa27.62■■■□□ 2.01
SNF8-213ENST00000514929 GINS2Q9Y248 185 aa27.62■■■□□ 2.01
SNF8-213ENST00000514929 KDM3AQ9Y4C1 1321 aa27.62■■■□□ 2.01
SNF8-213ENST00000514929 SLC37A4O43826 429 aa27.61■■■□□ 2.01
SNF8-213ENST00000514929 ZNF862O60290 1169 aa27.61■■■□□ 2.01
SNF8-213ENST00000514929 JAK2O60674 1132 aa27.61■■■□□ 2.01
SNF8-213ENST00000514929 GCFC2P16383 781 aaKnown RBP27.61■■■□□ 2.01
SNF8-213ENST00000514929 ERVK-21P61565 698 aa27.61■■■□□ 2.01
SNF8-213ENST00000514929 PRKCEQ02156 737 aa27.61■■■□□ 2.01
SNF8-213ENST00000514929 PAK2Q13177 524 aa27.61■■■□□ 2.01
SNF8-213ENST00000514929 UGCGQ16739 394 aa27.61■■■□□ 2.01
SNF8-213ENST00000514929 NAP1L4Q99733 375 aaKnown RBP27.61■■■□□ 2.01
SNF8-213ENST00000514929 DLL1O00548 723 aa27.6■■■□□ 2.01
SNF8-213ENST00000514929 ENPP3O14638 875 aa27.6■■■□□ 2.01
SNF8-213ENST00000514929 CCNT1O60563 726 aaKnown RBP27.6■■■□□ 2.01
SNF8-213ENST00000514929 FOSBP53539 338 aa27.6■■■□□ 2.01
SNF8-213ENST00000514929 TRIM29Q14134 588 aa27.6■■■□□ 2.01
SNF8-213ENST00000514929 PPP4R3AQ6IN85 833 aa27.6■■■□□ 2.01
SNF8-213ENST00000514929 SP7Q8TDD2 431 aaPredicted RBP27.6■■■□□ 2.01
SNF8-213ENST00000514929 FTHL17Q9BXU8 183 aa27.6■■■□□ 2.01
SNF8-213ENST00000514929 PADI3Q9ULW8 664 aa27.6■■■□□ 2.01
SNF8-213ENST00000514929 MTCH2Q9Y6C9 303 aa27.6■■■□□ 2.01
SNF8-213ENST00000514929 A0A0C4DFX4 3053 aa27.59■■■□□ 2.01
SNF8-213ENST00000514929 MAGEB2O15479 319 aa27.59■■■□□ 2.01
SNF8-213ENST00000514929 POU3F3P20264 500 aaPredicted RBP27.59■■■□□ 2.01
SNF8-213ENST00000514929 NR5A1Q13285 461 aa27.59■■■□□ 2.01
SNF8-213ENST00000514929 GRB10Q13322 594 aa27.59■■■□□ 2.01
SNF8-213ENST00000514929 B3GNT9Q6UX72 402 aa27.59■■■□□ 2.01
SNF8-213ENST00000514929 FAM20AQ96MK3 541 aa27.59■■■□□ 2.01
SNF8-213ENST00000514929 WDR81Q562E7 1941 aa27.59■■■□□ 2.01
SNF8-213ENST00000514929 MARCH6O60337 910 aa27.58■■■□□ 2.01
SNF8-213ENST00000514929 EARS2Q5JPH6 523 aaKnown RBP27.58■■■□□ 2.01
SNF8-213ENST00000514929 PPP1R16BQ96T49 567 aa27.58■■■□□ 2.01
SNF8-213ENST00000514929 KCNMB3Q9NPA1 279 aa27.58■■■□□ 2.01
SNF8-213ENST00000514929 PRDM6Q9NQX0 595 aa27.58■■■□□ 2.01
SNF8-213ENST00000514929 TRANK1O15050 2925 aa27.57■■■□□ 2
SNF8-213ENST00000514929 EVPLQ92817 2033 aa27.57■■■□□ 2
SNF8-213ENST00000514929 COL4A4P53420 1690 aaPredicted RBP27.57■■■□□ 2
SNF8-213ENST00000514929 MMP1P03956 469 aa27.57■■■□□ 2
SNF8-213ENST00000514929 TMOD1P28289 359 aa27.57■■■□□ 2
SNF8-213ENST00000514929 ST3GAL1Q11201 340 aa27.57■■■□□ 2
SNF8-213ENST00000514929 NFX1Q12986 1120 aaKnown RBP27.57■■■□□ 2
SNF8-213ENST00000514929 TMEM266Q2M3C6 531 aa27.57■■■□□ 2
SNF8-213ENST00000514929 GDPD5Q8WTR4 605 aa27.57■■■□□ 2
SNF8-213ENST00000514929 C17orf80Q9BSJ5 609 aa27.57■■■□□ 2
SNF8-213ENST00000514929 SUGCTQ9HAC7 445 aa27.57■■■□□ 2
SNF8-213ENST00000514929 CDHR5Q9HBB8 845 aa27.57■■■□□ 2
SNF8-213ENST00000514929 LOXHD1Q8IVV2 1947 aa27.57■■■□□ 2
SNF8-213ENST00000514929 FAM205CA6NFA0 338 aa27.56■■■□□ 2
SNF8-213ENST00000514929 RPS6KA5O75582 802 aa27.56■■■□□ 2
SNF8-213ENST00000514929 VTNP04004 478 aa27.56■■■□□ 2
SNF8-213ENST00000514929 CLCN3P51790 818 aa27.56■■■□□ 2
SNF8-213ENST00000514929 KIZQ2M2Z5 673 aa27.56■■■□□ 2
SNF8-213ENST00000514929 KRT40Q6A162 431 aa27.56■■■□□ 2
SNF8-213ENST00000514929 EFCAB12Q6NXP0 572 aa27.56■■■□□ 2
SNF8-213ENST00000514929 CCDC83Q8IWF9 413 aa27.56■■■□□ 2
SNF8-213ENST00000514929 LINC01599Q8WXQ3 324 aa27.56■■■□□ 2
SNF8-213ENST00000514929 MAP7D2Q96T17 732 aa27.56■■■□□ 2
SNF8-213ENST00000514929 SEPT9Q9UHD8 586 aaPredicted RBP27.56■■■□□ 2
SNF8-213ENST00000514929 AKT3Q9Y243 479 aa27.56■■■□□ 2
SNF8-213ENST00000514929 LPXNO60711 386 aa27.55■■■□□ 2
SNF8-213ENST00000514929 CRYBB1P53674 252 aaPredicted RBP27.55■■■□□ 2
SNF8-213ENST00000514929 XKR3Q5GH77 459 aa27.55■■■□□ 2
SNF8-213ENST00000514929 ODR4Q5SWX8 454 aa27.55■■■□□ 2
SNF8-213ENST00000514929 DIS3L2Q8IYB7 885 aaKnown RBP27.55■■■□□ 2
SNF8-213ENST00000514929 LRRC71Q8N4P6 559 aa27.55■■■□□ 2
SNF8-213ENST00000514929 BANK1Q8NDB2 785 aa27.55■■■□□ 2
SNF8-213ENST00000514929 FBXO22Q8NEZ5 403 aa27.55■■■□□ 2
SNF8-213ENST00000514929 TNFRSF25Q93038 417 aa27.55■■■□□ 2
SNF8-213ENST00000514929 SAMD11Q96NU1 681 aa27.55■■■□□ 2
SNF8-213ENST00000514929 KIF2CQ99661 725 aa27.55■■■□□ 2
SNF8-213ENST00000514929 TSPYL2Q9H2G4 693 aaPredicted RBP27.55■■■□□ 2
SNF8-213ENST00000514929 THEGQ9P2T0 379 aa27.55■■■□□ 2
SNF8-213ENST00000514929 NOC2LQ9Y3T9 749 aaKnown RBP27.55■■■□□ 2
SNF8-213ENST00000514929 BTBD18B2RXH4 712 aa27.54■■■□□ 2
SNF8-213ENST00000514929 TBX3O15119 743 aa27.54■■■□□ 2
SNF8-213ENST00000514929 TBC1D8BQ0IIM8 1120 aa27.54■■■□□ 2
SNF8-213ENST00000514929 PPP2R5CQ13362 524 aa27.54■■■□□ 2
SNF8-213ENST00000514929 COL4A6Q14031 1691 aa27.54■■■□□ 2
SNF8-213ENST00000514929 SKIV2LQ15477 1246 aaKnown RBP27.54■■■□□ 2
SNF8-213ENST00000514929 RTN4RL1Q86UN2 441 aaPredicted RBP27.54■■■□□ 2
SNF8-213ENST00000514929 POTEDQ86YR6 584 aa27.54■■■□□ 2
SNF8-213ENST00000514929 TMEM40Q8WWA1 233 aa27.54■■■□□ 2
SNF8-213ENST00000514929 ZSCAN31Q96LW9 406 aaPredicted RBP27.54■■■□□ 2
SNF8-213ENST00000514929 OSMRQ99650 979 aa27.54■■■□□ 2
SNF8-213ENST00000514929 VAV3Q9UKW4 847 aa27.54■■■□□ 2
SNF8-213ENST00000514929 BAG4O95429 457 aaKnown RBP27.53■■■□□ 2
SNF8-213ENST00000514929 MTERF2Q49AM1 385 aa27.53■■■□□ 2
SNF8-213ENST00000514929 FIBCD1Q8N539 461 aa27.53■■■□□ 2
SNF8-213ENST00000514929 HAS1Q92839 578 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms