RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 TBC1D8BQ0IIM8 1120 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 FAM26DQ5JW98 314 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 ZNF618Q5T7W0 954 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 KRT79Q5XKE5 535 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 ATL3Q6DD88 541 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 CHRDL2Q6WN34 429 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 RUFY4Q6ZNE9 571 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 ANO5Q75V66 913 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 CATSPER3Q86XQ3 398 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 WNT8BQ93098 351 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 AK8Q96MA6 479 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 NACC1Q96RE7 527 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 PRO3102Q9H379 93 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 IL23AQ9NPF7 189 aa15.96■□□□□ 0.15
NUP54-216ENST00000514901 DAXXQ9UER7 740 aaPredicted RBP15.96■□□□□ 0.15
NUP54-216ENST00000514901 A0A1W2PPC1 479 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 M0QZ92 97 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 SLC26A4O43511 780 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 C22orf31O95567 290 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 SPATA31C1P0DKV0 1188 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 ANP32AP39687 249 aaKnown RBP15.95■□□□□ 0.14
NUP54-216ENST00000514901 CDC42EP1Q00587 391 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 IL17AQ16552 155 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 MTERF2Q49AM1 385 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 FAM173BQ6P4H8 233 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 PSRC1Q6PGN9 363 aaPredicted RBP15.95■□□□□ 0.14
NUP54-216ENST00000514901 KCTD17Q8N5Z5 321 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 METTL13Q8N6R0 699 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 DNAJB3Q8WWF6 145 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 SCLYQ96I15 445 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 CEP170P1Q96L14 293 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 CYP26B1Q9NR63 512 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 WRAP73Q9P2S5 460 aaPredicted RBP15.95■□□□□ 0.14
NUP54-216ENST00000514901 CLIC4Q9Y696 253 aa15.95■□□□□ 0.14
NUP54-216ENST00000514901 LTBP2Q14767 1821 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 EVPLQ92817 2033 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 VWA3AA6NCI4 1184 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 BRD1O95696 1058 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 LONP1P36776 959 aaKnown RBP15.94■□□□□ 0.14
NUP54-216ENST00000514901 CCT6AP40227 531 aaKnown RBP15.94■□□□□ 0.14
NUP54-216ENST00000514901 RFC5P40937 340 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 DNM2P50570 870 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 SLC39A14Q15043 492 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 PTPAQ15257 358 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 EFCAB12Q6NXP0 572 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 TRAF7Q6Q0C0 670 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 KIAA0319LQ8IZA0 1049 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 CCDC43Q96MW1 224 aaKnown RBP15.94■□□□□ 0.14
NUP54-216ENST00000514901 CEP89Q96ST8 783 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 MAP7D2Q96T17 732 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 FAM49AQ9H0Q0 323 aaPredicted RBP15.94■□□□□ 0.14
NUP54-216ENST00000514901 ATP6V1DQ9Y5K8 247 aa15.94■□□□□ 0.14
NUP54-216ENST00000514901 IGKV6-21A0A0C4DH24 114 aa15.93■□□□□ 0.14
NUP54-216ENST00000514901 GAS2O43903 313 aaKnown RBP15.93■□□□□ 0.14
NUP54-216ENST00000514901 MAFO75444 373 aaPredicted RBP15.93■□□□□ 0.14
NUP54-216ENST00000514901 MED24O75448 989 aa15.93■□□□□ 0.14
NUP54-216ENST00000514901 CXCL10P02778 98 aa15.93■□□□□ 0.14
NUP54-216ENST00000514901 NASPP49321 788 aaPredicted RBP15.93■□□□□ 0.14
NUP54-216ENST00000514901 MRPS6P82932 125 aaKnown RBP15.93■□□□□ 0.14
NUP54-216ENST00000514901 PKP1Q13835 747 aa15.93■□□□□ 0.14
NUP54-216ENST00000514901 XKR9Q5GH70 373 aa15.93■□□□□ 0.14
NUP54-216ENST00000514901 FOXD4L5Q5VV16 416 aaPredicted RBP15.93■□□□□ 0.14
NUP54-216ENST00000514901 FAM43BQ6ZT52 329 aaPredicted RBP15.93■□□□□ 0.14
NUP54-216ENST00000514901 SNX29Q8TEQ0 813 aa15.93■□□□□ 0.14
NUP54-216ENST00000514901 FOXD4L4Q8WXT5 416 aaPredicted RBP15.93■□□□□ 0.14
NUP54-216ENST00000514901 SLC7A3Q8WY07 619 aa15.93■□□□□ 0.14
NUP54-216ENST00000514901 USP28Q96RU2 1077 aa15.93■□□□□ 0.14
NUP54-216ENST00000514901 SUGCTQ9HAC7 445 aa15.93■□□□□ 0.14
NUP54-216ENST00000514901 DBR1Q9UK59 544 aaKnown RBP15.93■□□□□ 0.14
NUP54-216ENST00000514901 CFAP45Q9UL16 551 aa15.93■□□□□ 0.14
NUP54-216ENST00000514901 COLQQ9Y215 455 aaPredicted RBP15.93■□□□□ 0.14
NUP54-216ENST00000514901 SRPRBQ9Y5M8 271 aaKnown RBP15.93■□□□□ 0.14
NUP54-216ENST00000514901 SQORQ9Y6N5 450 aa15.93■□□□□ 0.14
NUP54-216ENST00000514901 TRIOBPQ9H2D6 2365 aa15.93■□□□□ 0.14
NUP54-216ENST00000514901 RANBP2P49792 3224 aaKnown RBP15.92■□□□□ 0.14
NUP54-216ENST00000514901 FGBP02675 491 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 CHRNA1P02708 482 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 ACTN1P12814 892 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 NPEPPSP55786 919 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 NUCB2P80303 420 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 CEBPZQ03701 1054 aaKnown RBP15.92■□□□□ 0.14
NUP54-216ENST00000514901 STK38Q15208 465 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 TMEM240Q5SV17 173 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 PLA2G4FQ68DD2 849 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 DEFB128Q7Z7B8 93 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 TDHQ8IZJ6 230 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 LINC01465Q8N7H1 131 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 USP38Q8NB14 1042 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 ZBTB10Q96DT7 871 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 CELF4Q9BZC1 486 aaKnown RBP15.92■□□□□ 0.14
NUP54-216ENST00000514901 FTOQ9C0B1 505 aaKnown RBP eCLIP15.92■□□□□ 0.14
NUP54-216ENST00000514901 NT5C3AQ9H0P0 336 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 MTIF3Q9H2K0 278 aaKnown RBP15.92■□□□□ 0.14
NUP54-216ENST00000514901 DHX33Q9H6R0 707 aaKnown RBP15.92■□□□□ 0.14
NUP54-216ENST00000514901 DNM3Q9UQ16 869 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 TRPV2Q9Y5S1 764 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 KDM3AQ9Y4C1 1321 aa15.92■□□□□ 0.14
NUP54-216ENST00000514901 TMEM150BA6NC51 233 aa15.91■□□□□ 0.14
NUP54-216ENST00000514901 NBNO60934 754 aa15.91■□□□□ 0.14
NUP54-216ENST00000514901 DGAT1O75907 488 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms