RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 FOXD4L3Q6VB84 417 aaPredicted RBP9.33□□□□□ -0.92
CCL28-204ENST00000514421 C16orf59Q7L2K0 433 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 RPAINQ86UA6 219 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 RSPH3Q86UC2 560 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 C4orf32Q8N8J7 132 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 LMBR1Q8WVP7 490 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 DHX38Q92620 1227 aaKnown RBP9.33□□□□□ -0.92
CCL28-204ENST00000514421 FAM167AQ96KS9 214 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 DCBLD2Q96PD2 775 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 FUCA2Q9BTY2 467 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 WNT8AQ9H1J5 351 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 TMEM60Q9H2L4 133 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 TTC12Q9H892 705 aaPredicted RBP9.33□□□□□ -0.92
CCL28-204ENST00000514421 IL23AQ9NPF7 189 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 PCDH10Q9P2E7 1040 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 VAV3Q9UKW4 847 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 CEP131Q9UPN4 1083 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 PCDHA2Q9Y5H9 948 aa9.33□□□□□ -0.92
CCL28-204ENST00000514421 A0A1W2PQ27 194 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 A0A1W2PQ64 194 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 A0A1W2PQD8 194 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 RSPH10B2B2RC85 870 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 CAND2O75155 1236 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 OATP04181 439 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 RPLP2P05387 115 aaKnown RBP9.32□□□□□ -0.92
CCL28-204ENST00000514421 PFKMP08237 780 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 RSPH10BP0C881 870 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 ACRP10323 421 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 KLRC1P26715 233 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 THPOP40225 353 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 QARSP47897 775 aaKnown RBP9.32□□□□□ -0.92
CCL28-204ENST00000514421 EPHB4P54760 987 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 SHHQ15465 462 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 XKR3Q5GH77 459 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 HABP4Q5JVS0 413 aaKnown RBP9.32□□□□□ -0.92
CCL28-204ENST00000514421 ZNF618Q5T7W0 954 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 MTHFD1LQ6UB35 978 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 TRMT1LQ7Z2T5 733 aaKnown RBP9.32□□□□□ -0.92
CCL28-204ENST00000514421 TDHQ8IZJ6 230 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 NME8Q8N427 588 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 LINC00301Q8NCQ3 95 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 SCLYQ96I15 445 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 USP28Q96RU2 1077 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 NIFKQ9BYG3 293 aaKnown RBP9.32□□□□□ -0.92
CCL28-204ENST00000514421 DDX19AQ9NUU7 478 aaKnown RBP9.32□□□□□ -0.92
CCL28-204ENST00000514421 TFIP11Q9UBB9 837 aaKnown RBP9.32□□□□□ -0.92
CCL28-204ENST00000514421 TUBE1Q9UJT0 475 aa9.32□□□□□ -0.92
CCL28-204ENST00000514421 SMIM35A0A1B0GVV1 85 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 SYCE3A1L190 88 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 MAGEB2O15479 319 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 ZNF862O60290 1169 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 SLITRK3O94933 977 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 STBD1O95210 358 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 OR52Z1P0C646 297 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 CD44P16070 742 aaKnown RBP9.31□□□□□ -0.92
CCL28-204ENST00000514421 TECP42680 631 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 SPIRE1Q08AE8 756 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 PTGDRQ13258 359 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 PDIA5Q14554 519 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 FAM26DQ5JW98 314 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 TMEM240Q5SV17 173 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 NCAPH2Q6IBW4 605 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 PSRC1Q6PGN9 363 aaPredicted RBP9.31□□□□□ -0.92
CCL28-204ENST00000514421 ZNF365Q70YC5 407 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 LRRC8DQ7L1W4 858 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 OTUD6AQ7L8S5 288 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 KCNG4Q8TDN1 519 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 WNT8BQ93098 351 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 HSD17B14Q9BPX1 270 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCL28-204ENST00000514421 FTOQ9C0B1 505 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCL28-204ENST00000514421 ZSWIM4Q9H7M6 989 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.31□□□□□ -0.92
CCL28-204ENST00000514421 PCDHB6Q9Y5E3 794 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 COL1A2P08123 1366 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 ALPK3Q96L96 1907 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 IGSF9BQ9UPX0 1349 aa9.31□□□□□ -0.92
CCL28-204ENST00000514421 FAM237AA0A1B0GTK4 181 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 ZBTB42B2RXF5 422 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 LAD1O00515 517 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 CXCL10P02778 98 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 LIG1P18858 919 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 TMOD1P28289 359 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 PRKCEQ02156 737 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 GPNMBQ14956 572 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 SLC39A14Q15043 492 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 TARBP2Q15633 366 aaKnown RBP9.3□□□□□ -0.92
CCL28-204ENST00000514421 UGCGQ16739 394 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 LRIT3Q3SXY7 679 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 C9orf50Q5SZB4 431 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 IER5Q5VY09 327 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 ADALQ6DHV7 355 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 TRAF7Q6Q0C0 670 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 RUFY4Q6ZNE9 571 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 DEFB128Q7Z7B8 93 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 TPH2Q8IWU9 490 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 C4orf19Q8IY42 314 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 EXOC8Q8IYI6 725 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 KIAA0319LQ8IZA0 1049 aa9.3□□□□□ -0.92
CCL28-204ENST00000514421 ZNF710Q8N1W2 664 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms