RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 TMEM40Q8WWA1 233 aa13.87□□□□□ -0.19
SNHG4-208ENST00000514110 PLVAPQ9BX97 442 aa13.87□□□□□ -0.19
SNHG4-208ENST00000514110 C6orf50Q9HD87 102 aa13.87□□□□□ -0.19
SNHG4-208ENST00000514110 ERVK-5Q9HDB9 667 aa13.87□□□□□ -0.19
SNHG4-208ENST00000514110 GINS2Q9Y248 185 aa13.87□□□□□ -0.19
SNHG4-208ENST00000514110 NOC2LQ9Y3T9 749 aaKnown RBP13.87□□□□□ -0.19
SNHG4-208ENST00000514110 COL1A2P08123 1366 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 FAM86C2PA6NEL3 165 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 EDIL3O43854 480 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 MGEA5O60502 916 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 GPR37L1O60883 481 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 MMP1P03956 469 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 STAG3L1P0CL83 205 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 IBSPP21815 317 aaPredicted RBP13.86□□□□□ -0.19
SNHG4-208ENST00000514110 DNAJB1P25685 340 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 SSTR3P32745 418 aaPredicted RBP13.86□□□□□ -0.19
SNHG4-208ENST00000514110 GTF2F1P35269 517 aaKnown RBP eCLIP13.86□□□□□ -0.19
SNHG4-208ENST00000514110 DLX2Q07687 328 aaPredicted RBP13.86□□□□□ -0.19
SNHG4-208ENST00000514110 NFX1Q12986 1120 aaKnown RBP13.86□□□□□ -0.19
SNHG4-208ENST00000514110 CTC1Q2NKJ3 1217 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 ZNF484Q5JVG2 852 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 TMEM31Q5JXX7 168 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 TRMT1LQ7Z2T5 733 aaKnown RBP13.86□□□□□ -0.19
SNHG4-208ENST00000514110 FBXL16Q8N461 479 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 CCDC12Q8WUD4 166 aaPredicted RBP13.86□□□□□ -0.19
SNHG4-208ENST00000514110 PPP1R16BQ96T49 567 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 AGXT2Q9BYV1 514 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 TBC1D22BQ9NU19 505 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 PLAGL2Q9UPG8 496 aa13.86□□□□□ -0.19
SNHG4-208ENST00000514110 MAFBQ9Y5Q3 323 aaPredicted RBP13.86□□□□□ -0.19
SNHG4-208ENST00000514110 RPS6KA5O75582 802 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 C22orf31O95567 290 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 ITGB1P05556 798 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 SARSP49591 514 aaKnown RBP13.85□□□□□ -0.19
SNHG4-208ENST00000514110 SETQ01105 290 aaPredicted RBP13.85□□□□□ -0.19
SNHG4-208ENST00000514110 PRR16Q569H4 304 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 MCTP2Q6DN12 878 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 ZNF746Q6NUN9 644 aaPredicted RBP13.85□□□□□ -0.19
SNHG4-208ENST00000514110 CKAP2LQ8IYA6 745 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 KLHL23Q8NBE8 558 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 P2RX5Q93086 422 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 LENG9Q96B70 501 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 SLC26A6Q9BXS9 759 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 IGFLR1Q9H665 355 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 NCOA5Q9HCD5 579 aaKnown RBP13.85□□□□□ -0.19
SNHG4-208ENST00000514110 LRFN2Q9ULH4 789 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 ST3GAL5Q9UNP4 418 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 C5orf42Q9H799 3197 aa13.85□□□□□ -0.19
SNHG4-208ENST00000514110 MYO7AQ13402 2215 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 LINC01565O15544 149 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 NCK2O43639 380 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 VTNP04004 478 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 PSAPP07602 524 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 GNA11P29992 359 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 PDIA3P30101 505 aaKnown RBP13.84□□□□□ -0.19
SNHG4-208ENST00000514110 CIITAP33076 1130 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 AKAP17AQ02040 695 aaKnown RBP13.84□□□□□ -0.19
SNHG4-208ENST00000514110 CLUL1Q15846 466 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 KIZQ2M2Z5 673 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 ADGRD2Q7Z7M1 963 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 SMAP1Q8IYB5 467 aaPredicted RBP13.84□□□□□ -0.19
SNHG4-208ENST00000514110 SPPL3Q8TCT6 385 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 BBXQ8WY36 941 aaPredicted RBP13.84□□□□□ -0.19
SNHG4-208ENST00000514110 ADAM2Q99965 735 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 RNF26Q9BY78 433 aaPredicted RBP13.84□□□□□ -0.19
SNHG4-208ENST00000514110 VPS54Q9P1Q0 977 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 GABBR1Q9UBS5 961 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 PCDHB7Q9Y5E2 793 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 PCDHA10Q9Y5I2 948 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 EVPLQ92817 2033 aa13.84□□□□□ -0.19
SNHG4-208ENST00000514110 TBX10O75333 385 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 GPR32O75388 356 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 IFNAR1P17181 557 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 IRS1P35568 1242 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 PLA2G5P39877 138 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 CRYBB1P53674 252 aaPredicted RBP13.83□□□□□ -0.2
SNHG4-208ENST00000514110 EVCP57679 992 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 CCT2P78371 535 aaKnown RBP13.83□□□□□ -0.2
SNHG4-208ENST00000514110 ZP2Q05996 745 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 NAALADL2Q58DX5 795 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 FAM102BQ5T8I3 360 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 FAM228AQ86W67 206 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 METTL13Q8N6R0 699 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 BICD2Q8TD16 824 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 OSMRQ99650 979 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 RTN4Q9NQC3 1192 aaKnown RBP13.83□□□□□ -0.2
SNHG4-208ENST00000514110 RGS18Q9NS28 235 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 FAM50BQ9Y247 325 aa13.83□□□□□ -0.2
SNHG4-208ENST00000514110 DENND3A2RUS2 1198 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 C9IYK1 514 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 GPR182O15218 404 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 MSH4O15457 936 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 MBTPS2O43462 519 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 ZNF862O60290 1169 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 PSMA5P28066 241 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 CLCN3P51790 818 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 ADAM15Q13444 863 aa13.82□□□□□ -0.2
SNHG4-208ENST00000514110 TOB2Q14106 344 aaPredicted RBP13.82□□□□□ -0.2
SNHG4-208ENST00000514110 SLC24A5Q71RS6 500 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms