RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 LIMCH1Q9UPQ0 1083 aa7.34□□□□□ -1.23
KDM3B-208ENST00000512928 PCDHA2Q9Y5H9 948 aa7.34□□□□□ -1.23
KDM3B-208ENST00000512928 TRPV2Q9Y5S1 764 aa7.34□□□□□ -1.23
KDM3B-208ENST00000512928 COL1A2P08123 1366 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 REV3LO60673 3130 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 IGKV6D-21A0A0A0MT36 114 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 SMIM35A0A1B0GVV1 85 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 M0R2N6 131 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 GTPBP6O43824 516 aaPredicted RBP7.33□□□□□ -1.24
KDM3B-208ENST00000512928 SLC37A4O43826 429 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 ARHGEF15O94989 841 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 OATP04181 439 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 FDPSP14324 419 aaKnown RBP7.33□□□□□ -1.24
KDM3B-208ENST00000512928 CD52P31358 61 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 SFNP31947 248 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 TFF2Q03403 129 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 TAP1Q03518 808 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 MGAT3Q09327 533 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 NFX1Q12986 1120 aaKnown RBP7.33□□□□□ -1.24
KDM3B-208ENST00000512928 NR5A1Q13285 461 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 GNL2Q13823 731 aaKnown RBP7.33□□□□□ -1.24
KDM3B-208ENST00000512928 NPY5RQ15761 445 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 UGCGQ16739 394 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 TMEM266Q2M3C6 531 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 Q4G0T1 1027 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 ZNF484Q5JVG2 852 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 FAM26DQ5JW98 314 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 FBXO47Q5MNV8 452 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 TSHZ1Q6ZSZ6 1077 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 FAM177A1Q8N128 213 aaPredicted RBP7.33□□□□□ -1.24
KDM3B-208ENST00000512928 FAM184AQ8NB25 1140 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 BANK1Q8NDB2 785 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 NSUN7Q8NE18 718 aaKnown RBP7.33□□□□□ -1.24
KDM3B-208ENST00000512928 BBXQ8WY36 941 aaPredicted RBP7.33□□□□□ -1.24
KDM3B-208ENST00000512928 FAM167AQ96KS9 214 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 RAD9AQ99638 391 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 SUGCTQ9HAC7 445 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 NRBP2Q9NSY0 501 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 CEP131Q9UPN4 1083 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 AKT3Q9Y243 479 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 INSL6Q9Y581 213 aa7.33□□□□□ -1.24
KDM3B-208ENST00000512928 MAFBQ9Y5Q3 323 aaPredicted RBP7.33□□□□□ -1.24
KDM3B-208ENST00000512928 IGSF9BQ9UPX0 1349 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 CYP3A7-CYP3A51PA0A087WV96 503 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 LINC01553A4QN01 128 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 FAM205CA6NFA0 338 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 EPOPA6NHQ4 379 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 EDIL3O43854 480 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 RPS6KA5O75582 802 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 PSMD10O75832 226 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 BAG4O95429 457 aaKnown RBP7.32□□□□□ -1.24
KDM3B-208ENST00000512928 C22orf31O95567 290 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 MMP1P03956 469 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 VTNP04004 478 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 GCFC2P16383 781 aaKnown RBP7.32□□□□□ -1.24
KDM3B-208ENST00000512928 ATP2B1P20020 1258 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 ATP4AP20648 1035 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 CYP3A7P24462 503 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 TMOD1P28289 359 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 CLCN3P51790 818 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 TBC1D8BQ0IIM8 1120 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 SAFBQ15424 915 aaKnown RBP eCLIP7.32□□□□□ -1.24
KDM3B-208ENST00000512928 KIZQ2M2Z5 673 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 MTERF2Q49AM1 385 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 NCAPH2Q6IBW4 605 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 EFCAB12Q6NXP0 572 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 MOXD1Q6UVY6 613 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 RPAINQ86UA6 219 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 DIS3L2Q8IYB7 885 aaKnown RBP7.32□□□□□ -1.24
KDM3B-208ENST00000512928 NME8Q8N427 588 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 LRRC71Q8N4P6 559 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 ETNPPLQ8TBG4 499 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 GDPD5Q8WTR4 605 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 ZNF668Q96K58 619 aaPredicted RBP7.32□□□□□ -1.24
KDM3B-208ENST00000512928 TGS1Q96RS0 853 aaKnown RBP7.32□□□□□ -1.24
KDM3B-208ENST00000512928 MAP7D2Q96T17 732 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 NAP1L4Q99733 375 aaKnown RBP7.32□□□□□ -1.24
KDM3B-208ENST00000512928 SH2D3AQ9BRG2 576 aa7.32□□□□□ -1.24
KDM3B-208ENST00000512928 CELF4Q9BZC1 486 aaKnown RBP7.32□□□□□ -1.24
KDM3B-208ENST00000512928 AGO3Q9H9G7 860 aaKnown RBP7.32□□□□□ -1.24
KDM3B-208ENST00000512928 SIP14410 1827 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 TET1Q8NFU7 2136 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.31□□□□□ -1.24
KDM3B-208ENST00000512928 DENND3A2RUS2 1198 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 TMEM150BA6NC51 233 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 DDX11L8A8MPP1 907 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 ZBTB42B2RXF5 422 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 BTBD18B2RXH4 712 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 TNFRSF10AO00220 468 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 MAGEB2O15479 319 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 ST18O60284 1047 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 ZNF862O60290 1169 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 CSPG5O95196 566 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 KCNQ1P51787 676 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 GRB10Q13322 594 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 EARS2Q5JPH6 523 aaKnown RBP7.31□□□□□ -1.24
KDM3B-208ENST00000512928 PPP4R3AQ6IN85 833 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 KIAA0319LQ8IZA0 1049 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 FBXO22Q8NEZ5 403 aa7.31□□□□□ -1.24
KDM3B-208ENST00000512928 RDM1Q8NG50 284 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms