RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 PCDHB7Q9Y5E2 793 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 CDY2AQ9Y6F7 541 aa11.01□□□□□ -0.65
CLCN3-208ENST00000512813 FRMPD2Q68DX3 1309 aaPredicted RBP11.01□□□□□ -0.65
CLCN3-208ENST00000512813 GREB1Q4ZG55 1949 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 GBP2P32456 591 aaPredicted RBP11□□□□□ -0.65
CLCN3-208ENST00000512813 SLC16A2P36021 539 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 NRLP54845 237 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 PRKCQQ04759 706 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 ZNF252P-AS1Q0IIN9 211 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 UBXN2BQ14CS0 331 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 CCDC96Q2M329 555 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 PPP4R3BQ5MIZ7 849 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 STPG1Q5TH74 334 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 KCNV1Q6PIU1 500 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 KCNT2Q6UVM3 1135 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 SYTL5Q8TDW5 730 aaPredicted RBP11□□□□□ -0.65
CLCN3-208ENST00000512813 ZNF558Q96NG5 402 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 TAAR1Q96RJ0 339 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 USP26Q9BXU7 913 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 COL20A1Q9P218 1284 aa11□□□□□ -0.65
CLCN3-208ENST00000512813 MTF2Q9Y483 593 aaPredicted RBP11□□□□□ -0.65
CLCN3-208ENST00000512813 MINDY4BA8MYZ0 360 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 SORBS3O60504 671 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 SURF6O75683 361 aaKnown RBP10.99□□□□□ -0.65
CLCN3-208ENST00000512813 UBA1P22314 1058 aaKnown RBP10.99□□□□□ -0.65
CLCN3-208ENST00000512813 RPS9P46781 194 aaKnown RBP10.99□□□□□ -0.65
CLCN3-208ENST00000512813 MRPS6P82932 125 aaKnown RBP10.99□□□□□ -0.65
CLCN3-208ENST00000512813 DDX10Q13206 875 aaKnown RBP10.99□□□□□ -0.65
CLCN3-208ENST00000512813 FAM102BQ5T8I3 360 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 TTBK2Q6IQ55 1244 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 GIMAP6Q6P9H5 292 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 POTEHQ6S545 545 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.99□□□□□ -0.65
CLCN3-208ENST00000512813 SSH3Q8TE77 659 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 DCAF4Q8WV16 495 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 STAMQ92783 540 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 CLDN23Q96B33 292 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 KLHL5Q96PQ7 755 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 RMDN3Q96TC7 470 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 DNAJC2Q99543 621 aaKnown RBP10.99□□□□□ -0.65
CLCN3-208ENST00000512813 HNRNPABQ99729 332 aaKnown RBP10.99□□□□□ -0.65
CLCN3-208ENST00000512813 SCNM1Q9BWG6 230 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 LTB4R2Q9NPC1 389 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 PADI3Q9ULW8 664 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 NOP58Q9Y2X3 529 aaKnown RBP10.99□□□□□ -0.65
CLCN3-208ENST00000512813 IRAK3Q9Y616 596 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 LAMA4Q16363 1823 aa10.99□□□□□ -0.65
CLCN3-208ENST00000512813 MYH7P12883 1935 aa10.98□□□□□ -0.65
CLCN3-208ENST00000512813 FAM170BA6NMN3 283 aa10.98□□□□□ -0.65
CLCN3-208ENST00000512813 ANHXE9PGG2 379 aa10.98□□□□□ -0.65
CLCN3-208ENST00000512813 NOVA1P51513 510 aaKnown RBP10.98□□□□□ -0.65
CLCN3-208ENST00000512813 PAK2Q13177 524 aa10.98□□□□□ -0.65
CLCN3-208ENST00000512813 HTR4Q13639 388 aa10.98□□□□□ -0.65
CLCN3-208ENST00000512813 SIM2Q14190 667 aaPredicted RBP10.98□□□□□ -0.65
CLCN3-208ENST00000512813 BMS1Q14692 1282 aaKnown RBP10.98□□□□□ -0.65
CLCN3-208ENST00000512813 UBE3CQ15386 1083 aa10.98□□□□□ -0.65
CLCN3-208ENST00000512813 MLF2Q15773 248 aaPredicted RBP10.98□□□□□ -0.65
CLCN3-208ENST00000512813 C19orf48Q6RUI8 117 aa10.98□□□□□ -0.65
CLCN3-208ENST00000512813 RSPO2Q6UXX9 243 aaPredicted RBP10.98□□□□□ -0.65
CLCN3-208ENST00000512813 FAM43BQ6ZT52 329 aaPredicted RBP10.98□□□□□ -0.65
CLCN3-208ENST00000512813 MYADMQ96S97 322 aa10.98□□□□□ -0.65
CLCN3-208ENST00000512813 TMX1Q9H3N1 280 aa10.98□□□□□ -0.65
CLCN3-208ENST00000512813 SPG21Q9NZD8 308 aa10.98□□□□□ -0.65
CLCN3-208ENST00000512813 ZNF215Q9UL58 517 aaPredicted RBP10.98□□□□□ -0.65
CLCN3-208ENST00000512813 NOB1Q9ULX3 412 aaKnown RBP10.98□□□□□ -0.65
CLCN3-208ENST00000512813 STX8Q9UNK0 236 aa10.98□□□□□ -0.65
CLCN3-208ENST00000512813 TEP1Q99973 2627 aaKnown RBP10.98□□□□□ -0.65
CLCN3-208ENST00000512813 PIEZO2Q9H5I5 2752 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.97□□□□□ -0.65
CLCN3-208ENST00000512813 GSG1L2A8MUP6 293 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 CXCL14O95715 111 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 TOP3BO95985 862 aaKnown RBP10.97□□□□□ -0.65
CLCN3-208ENST00000512813 RPLP2P05387 115 aaKnown RBP10.97□□□□□ -0.65
CLCN3-208ENST00000512813 NR3C2P08235 984 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 EIF2AK2P19525 551 aaKnown RBP10.97□□□□□ -0.65
CLCN3-208ENST00000512813 IBSPP21815 317 aaPredicted RBP10.97□□□□□ -0.65
CLCN3-208ENST00000512813 CA8P35219 290 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 PBX3P40426 434 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 SP2Q02086 613 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 C19orf57Q0VDD7 668 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 SNW1Q13573 536 aaKnown RBP10.97□□□□□ -0.65
CLCN3-208ENST00000512813 CCDC184Q52MB2 194 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 ZBTB41Q5SVQ8 909 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 ARHGEF16Q5VV41 709 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 AACSQ86V21 672 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 PROSER1Q86XN7 944 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 TRIM50Q86XT4 487 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 CMASQ8NFW8 434 aaPredicted RBP10.97□□□□□ -0.65
CLCN3-208ENST00000512813 DNAJB3Q8WWF6 145 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 BBXQ8WY36 941 aaPredicted RBP10.97□□□□□ -0.65
CLCN3-208ENST00000512813 RHOBTB2Q9BYZ6 727 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.97□□□□□ -0.65
CLCN3-208ENST00000512813 MLXIPQ9HAP2 919 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 WDR6Q9NNW5 1121 aaKnown RBP10.97□□□□□ -0.65
CLCN3-208ENST00000512813 CLUHO75153 1309 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 IGSF9BQ9UPX0 1349 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 KAT6AQ92794 2004 aa10.97□□□□□ -0.65
CLCN3-208ENST00000512813 ANKRD17O75179 2603 aaKnown RBP10.97□□□□□ -0.65
CLCN3-208ENST00000512813 LAMA1P25391 3075 aa10.96□□□□□ -0.65
CLCN3-208ENST00000512813 TEX15Q9BXT5 2789 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms