RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 TYRO3Q06418 890 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CXCL9Q07325 125 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 GRM2Q14416 872 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CYP1B1Q16678 543 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SULT6B1Q6IMI4 303 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TTC27Q6P3X3 843 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 MTHFD1LQ6UB35 978 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 HHIPL2Q6UWX4 724 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCDC129Q6ZRS4 1044 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 NLRP10Q86W26 655 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ABTB2Q8N961 1025 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 FAM71BQ8TC56 605 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SMCR8Q8TEV9 937 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 NCAPGQ9BPX3 1015 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 LARP6Q9BRS8 491 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TMEM60Q9H2L4 133 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 RXFP3Q9NSD7 469 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SRRDQ9UH36 339 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 GGA2Q9UJY4 613 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 DNAH11Q96DT5 4516 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 NCOR2Q9Y618 2525 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 A0A0G2JLL6 359 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SPDYE3A6NKU9 549 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ANKRD63C9JTQ0 380 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 HAS3O00219 553 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 PPM1GO15355 546 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 DDX3YO15523 660 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ECE2O60344 883 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 EYA4O95677 639 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CASP1P29466 404 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 NMIQ13287 307 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SEPT6Q14141 434 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SPRYD7Q5W111 196 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 PRRT2Q7Z6L0 340 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 LINC01465Q8N7H1 131 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TTLL6Q8N841 843 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 FBXO27Q8NI29 283 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 MAGEC3Q8TD91 643 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 DYDC1Q8WWB3 177 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 RIN2Q8WYP3 895 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZNF274Q96GC6 653 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TIGD1Q96MW7 591 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 MAP7D2Q96T17 732 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 DBNDD2Q9BQY9 259 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 ERVK-5Q9HDB9 667 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 AVENQ9NQS1 362 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 DDX43Q9NXZ2 648 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 UBAP1Q9NZ09 502 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CXXC1Q9P0U4 656 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SNCAIPQ9Y6H5 919 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 AKAP6Q13023 2319 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 PI4KAP2A4QPH2 592 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CAPN14A8MX76 684 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCDC172P0C7W6 258 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SPATA31C1P0DKV0 1188 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 PSMA3P25788 255 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 USP8P40818 1118 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 NLRP12P59046 1061 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TMEM62Q0P6H9 643 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TBL3Q12788 808 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SF3A1Q15459 793 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TPD52L1Q16890 204 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TMEM132AQ24JP5 1023 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 RNF20Q5VTR2 975 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TBC1D9BQ66K14 1250 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TAS1R3Q7RTX0 852 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 HOMER1Q86YM7 354 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 FAM177A1Q8N128 213 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 PI4KAP1Q8N8J0 262 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SORT1Q99523 831 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 DSCC1Q9BVC3 393 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TRIM4Q9C037 500 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 MYLK2Q9H1R3 596 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 SLKQ9H2G2 1235 aaPredicted RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 LUC7LQ9NQ29 371 aaKnown RBP1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 TOMM22Q9NS69 142 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 VWA7Q9Y334 891 aa1.87□□□□□ -2.11
TRAPPC13-211ENST00000512009 RTTNQ86VV8 2226 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 F8P00451 2351 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZBTB42B2RXF5 422 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 AP1G1O43747 822 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 ADCY5O95622 1261 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 FGAP02671 866 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 CASP5P51878 434 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 FAM189BP81408 668 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 ERCC6LQ2NKX8 1250 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 HAUS3Q68CZ6 603 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZNF425Q6IV72 752 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 SPNS2Q8IVW8 549 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 SAMD3Q8N6K7 520 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 KBTBD3Q8NAB2 608 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZNF579Q8NAF0 562 aaKnown RBP1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 LINS1Q8NG48 757 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 ETNPPLQ8TBG4 499 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZNF483Q8TF39 744 aaPredicted RBP1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 RNF166Q96A37 237 aaPredicted RBP1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 TIMP4Q99727 224 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 TREX2Q9BQ50 279 aaPredicted RBP1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 BEGAINQ9BUH8 593 aa1.86□□□□□ -2.11
TRAPPC13-211ENST00000512009 SLC5A4Q9NY91 659 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms