RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 SHOX2O60902 331 aaPredicted RBP14.17□□□□□ -0.14
HMGB2-205ENST00000511316 TAL1P17542 331 aaPredicted RBP14.17□□□□□ -0.14
HMGB2-205ENST00000511316 CCNE1P24864 410 aa14.17□□□□□ -0.14
HMGB2-205ENST00000511316 OAZ1P54368 228 aa14.17□□□□□ -0.14
HMGB2-205ENST00000511316 CORO7P57737 925 aa14.17□□□□□ -0.14
HMGB2-205ENST00000511316 MAP3K21Q5TCX8 1036 aa14.17□□□□□ -0.14
HMGB2-205ENST00000511316 ALS2CLQ60I27 953 aa14.17□□□□□ -0.14
HMGB2-205ENST00000511316 EMBQ6PCB8 327 aa14.17□□□□□ -0.14
HMGB2-205ENST00000511316 CPXCR1Q8N123 301 aa14.17□□□□□ -0.14
HMGB2-205ENST00000511316 RASSF8Q8NHQ8 419 aa14.17□□□□□ -0.14
HMGB2-205ENST00000511316 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.17□□□□□ -0.149e-8■■□□□ 14.5
HMGB2-205ENST00000511316 SECISBP2LQ93073 1101 aaKnown RBP14.17□□□□□ -0.14
HMGB2-205ENST00000511316 MAD2L2Q9UI95 211 aa14.17□□□□□ -0.14
HMGB2-205ENST00000511316 DNAJC25-GNG10A0A024R161 153 aa14.16□□□□□ -0.14
HMGB2-205ENST00000511316 ZBED4O75132 1171 aa14.16□□□□□ -0.14
HMGB2-205ENST00000511316 CAPN15O75808 1086 aa14.16□□□□□ -0.14
HMGB2-205ENST00000511316 CPP00450 1065 aa14.16□□□□□ -0.14
HMGB2-205ENST00000511316 FDX1P10109 184 aa14.16□□□□□ -0.14
HMGB2-205ENST00000511316 ADORA2AP29274 412 aa14.16□□□□□ -0.14
HMGB2-205ENST00000511316 SNRNP48Q6IEG0 339 aaKnown RBP14.16□□□□□ -0.14
HMGB2-205ENST00000511316 CNNM4Q6P4Q7 775 aa14.16□□□□□ -0.14
HMGB2-205ENST00000511316 PIK3AP1Q6ZUJ8 805 aa14.16□□□□□ -0.14
HMGB2-205ENST00000511316 NCAPG2Q86XI2 1143 aa14.16□□□□□ -0.14
HMGB2-205ENST00000511316 NOA1Q8NC60 698 aaKnown RBP14.16□□□□□ -0.14
HMGB2-205ENST00000511316 SLAIN1Q8ND83 568 aa14.16□□□□□ -0.14
HMGB2-205ENST00000511316 SOCS4Q8WXH5 440 aa14.16□□□□□ -0.14
HMGB2-205ENST00000511316 KAT14Q9H8E8 782 aa14.16□□□□□ -0.14
HMGB2-205ENST00000511316 LRRIQ3A6PVS8 624 aaPredicted RBP14.15□□□□□ -0.14
HMGB2-205ENST00000511316 PRPF6O94906 941 aaKnown RBP14.15□□□□□ -0.14
HMGB2-205ENST00000511316 PLEKHA8P1O95397 391 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 EPB41P11171 864 aaKnown RBP14.15□□□□□ -0.14
HMGB2-205ENST00000511316 MCM7P33993 719 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 USP8P40818 1118 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 TTC31Q49AM3 519 aaPredicted RBP14.15□□□□□ -0.14
HMGB2-205ENST00000511316 CCNI2Q6ZMN8 369 aaPredicted RBP14.15□□□□□ -0.14
HMGB2-205ENST00000511316 SMYD4Q8IYR2 804 aaPredicted RBP14.15□□□□□ -0.14
HMGB2-205ENST00000511316 FGD4Q96M96 766 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 TUBGCP2Q9BSJ2 902 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 TTYH3Q9C0H2 523 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 A0A087WUV0 522 aaPredicted RBP14.15□□□□□ -0.14
HMGB2-205ENST00000511316 GOLGA6BA6NDN3 693 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 CYTH3O43739 400 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 INHAP05111 366 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 ZNF792Q3KQV3 632 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 GPATCH4Q5T3I0 446 aaKnown RBP14.15□□□□□ -0.14
HMGB2-205ENST00000511316 SYDE2Q5VT97 1194 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 TTI2Q6NXR4 508 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 CSGALNACT2Q8N6G5 542 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 P2RX5Q93086 422 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 MTMR8Q96EF0 704 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 CCDC42Q96M95 316 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 BLZF1Q9H2G9 400 aa14.15□□□□□ -0.14
HMGB2-205ENST00000511316 REXO2Q9Y3B8 237 aaKnown RBP14.15□□□□□ -0.14
HMGB2-205ENST00000511316 ZNFX1Q9P2E3 1918 aaKnown RBP14.14□□□□□ -0.15
HMGB2-205ENST00000511316 LCA5LO95447 670 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 ICAM1P05362 532 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 PGK2P07205 417 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 IDEP14735 1019 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 RGS2P41220 211 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 PAFAH1B1P43034 410 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 EPHB4P54760 987 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 SOX10P56693 466 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 TBC1D8BQ0IIM8 1120 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 CCDC96Q2M329 555 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 EARS2Q5JPH6 523 aaKnown RBP14.14□□□□□ -0.15
HMGB2-205ENST00000511316 NCAPH2Q6IBW4 605 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 POTEDQ86YR6 584 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 IRF2BP1Q8IU81 584 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 C10orf67Q8IYJ2 551 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 ADGRF4Q8IZF3 695 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 CMTR1Q8N1G2 835 aaKnown RBP14.14□□□□□ -0.15
HMGB2-205ENST00000511316 SRBD1Q8N5C6 995 aaKnown RBP14.14□□□□□ -0.15
HMGB2-205ENST00000511316 RNF10Q8N5U6 811 aaKnown RBP14.14□□□□□ -0.15
HMGB2-205ENST00000511316 C4orf32Q8N8J7 132 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 RUFY1Q96T51 708 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 C7orf25Q9BPX7 421 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 UNC93B1Q9H1C4 597 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 NHEJ1Q9H9Q4 299 aaPredicted RBP14.14□□□□□ -0.15
HMGB2-205ENST00000511316 JMJD4Q9H9V9 463 aa14.14□□□□□ -0.15
HMGB2-205ENST00000511316 PAK6Q9NQU5 681 aaPredicted RBP14.14□□□□□ -0.15
HMGB2-205ENST00000511316 GOLGA6CA6NDK9 693 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 FAM205CA6NFA0 338 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 SRRM3A6NNA2 597 aaPredicted RBP14.13□□□□□ -0.15
HMGB2-205ENST00000511316 hCG_1984214I3L0E3 225 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 MYCP01106 439 aaPredicted RBP14.13□□□□□ -0.15
HMGB2-205ENST00000511316 GOLGA6DP0CG33 693 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 FCER1AP12319 257 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 EN2P19622 333 aaPredicted RBP14.13□□□□□ -0.15
HMGB2-205ENST00000511316 CACNB2Q08289 660 aaPredicted RBP14.13□□□□□ -0.15
HMGB2-205ENST00000511316 WDR78Q5VTH9 848 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 LRRC31Q6UY01 552 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 KRT25Q7Z3Z0 450 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 ZNF713Q8N859 430 aaPredicted RBP14.13□□□□□ -0.15
HMGB2-205ENST00000511316 C1orf131Q8NDD1 294 aaKnown RBP14.13□□□□□ -0.15
HMGB2-205ENST00000511316 CHP1Q99653 195 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 APBA2Q99767 749 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 GOLGA6AQ9NYA3 693 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 RSPH14Q9UHP6 348 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 SNX12Q9UMY4 172 aa14.13□□□□□ -0.15
HMGB2-205ENST00000511316 PLAGL2Q9UPG8 496 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms