RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 SPO11Q9Y5K1 396 aa9.56□□□□□ -0.88
TRAPPC11-206ENST00000509857 KIAA0586Q9BVV6 1533 aa9.56□□□□□ -0.88
TRAPPC11-206ENST00000509857 FHOD3Q2V2M9 1422 aa9.56□□□□□ -0.88
TRAPPC11-206ENST00000509857 KNG1P01042 644 aa9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 MC4RP32245 332 aa9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 IL13P35225 146 aa9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 ZNF174Q15697 407 aa9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 SMAD2Q15796 467 aaKnown RBP9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 FAM26FQ5R3K3 315 aa9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 SP8Q8IXZ3 490 aa9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 NXPE1Q8N323 547 aa9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 MARCH10Q8NA82 808 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 OR2W6PQ8NHA6 318 aa9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 ADAMTS17Q8TE56 1095 aa9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 GBP4Q96PP9 640 aa9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 PCIF1Q9H4Z3 704 aa9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 CAAP1Q9H8G2 361 aa9.55□□□□□ -0.88
TRAPPC11-206ENST00000509857 CYP17A1P05093 508 aa9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 SCNN1BP51168 640 aa9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 FZD5Q13467 585 aa9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 DHCR24Q15392 516 aa9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 PHF19Q5T6S3 580 aa9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 KRT26Q7Z3Y9 468 aa9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 RTN4RL1Q86UN2 441 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 ZNF761Q86XN6 746 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 EFHBQ8N7U6 833 aa9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 FOXRED1Q96CU9 486 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 YTHDC1Q96MU7 727 aaKnown RBP9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 KCNC2Q96PR1 638 aa9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 AMNQ9BXJ7 453 aa9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 IFT57Q9NWB7 429 aa9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 GALNT8Q9NY28 637 aa9.54□□□□□ -0.88
TRAPPC11-206ENST00000509857 GOLGA6L22H0YM25 854 aa9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 FBXO21O94952 628 aa9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 SOX5P35711 763 aa9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 GLRBP48167 497 aa9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 STILQ15468 1287 aa9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 PRAMEF18Q5VWM3 479 aa9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 STPG3Q8N7X2 389 aa9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 CHAC2Q8WUX2 184 aa9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 CHTF18Q8WVB6 975 aa9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 LEO1Q8WVC0 666 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 ELF4Q99607 663 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 SPATA25Q9BR10 227 aa9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 EIF4G3O43432 1585 aaKnown RBP9.53□□□□□ -0.88
TRAPPC11-206ENST00000509857 EHBP1L1Q8N3D4 1523 aa9.52□□□□□ -0.88
TRAPPC11-206ENST00000509857 DDX3XO00571 662 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRAPPC11-206ENST00000509857 EPHA7Q15375 998 aa9.52□□□□□ -0.89
TRAPPC11-206ENST00000509857 LCE3BQ5TA77 95 aa9.52□□□□□ -0.89
TRAPPC11-206ENST00000509857 HIPK4Q8NE63 616 aa9.52□□□□□ -0.89
TRAPPC11-206ENST00000509857 C16orf92Q96LL3 132 aa9.52□□□□□ -0.89
TRAPPC11-206ENST00000509857 BTBD2Q9BX70 525 aa9.52□□□□□ -0.89
TRAPPC11-206ENST00000509857 THG1LQ9NWX6 298 aaKnown RBP9.52□□□□□ -0.89
TRAPPC11-206ENST00000509857 H2AFY2Q9P0M6 372 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC11-206ENST00000509857 HECW1Q76N89 1606 aa9.52□□□□□ -0.89
TRAPPC11-206ENST00000509857 GRIN2AQ12879 1464 aa9.52□□□□□ -0.89
TRAPPC11-206ENST00000509857 BPIP17213 487 aa9.51□□□□□ -0.89
TRAPPC11-206ENST00000509857 LSSP48449 732 aa9.51□□□□□ -0.89
TRAPPC11-206ENST00000509857 OCRLQ01968 901 aa9.51□□□□□ -0.89
TRAPPC11-206ENST00000509857 ESRP1Q6NXG1 681 aaKnown RBP9.51□□□□□ -0.89
TRAPPC11-206ENST00000509857 TRMT10BQ6PF06 316 aaKnown RBP9.51□□□□□ -0.89
TRAPPC11-206ENST00000509857 CXXC5Q7LFL8 322 aaKnown RBP9.51□□□□□ -0.89
TRAPPC11-206ENST00000509857 FOXB1Q99853 325 aa9.51□□□□□ -0.89
TRAPPC11-206ENST00000509857 TACO1Q9BSH4 297 aaKnown RBP9.51□□□□□ -0.89
TRAPPC11-206ENST00000509857 L2HGDHQ9H9P8 463 aa9.51□□□□□ -0.89
TRAPPC11-206ENST00000509857 UCKL1Q9NWZ5 548 aa9.51□□□□□ -0.89
TRAPPC11-206ENST00000509857 SYNJ2O15056 1496 aa9.51□□□□□ -0.89
TRAPPC11-206ENST00000509857 TTBK1Q5TCY1 1321 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC11-206ENST00000509857 PRAMEF22A3QJZ6 481 aa9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 C9orf118A6NHY6 69 aa9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 NOBOXO60393 691 aa9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 MAFO75444 373 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 KLHL18O94889 574 aa9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 SLC9A1P19634 815 aa9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 KCNC1P48547 511 aa9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 DPP8Q6V1X1 898 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 NME9Q86XW9 330 aa9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 TXNDC5Q8NBS9 432 aaKnown RBP9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 E2F7Q96AV8 911 aa9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 SCYL1Q96KG9 808 aa9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 ZNF608Q9ULD9 1512 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 SBNO2Q9Y2G9 1366 aa9.5□□□□□ -0.89
TRAPPC11-206ENST00000509857 BMP7P18075 431 aa9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 PTX3P26022 381 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 ADCYAP1R1P41586 468 aa9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 ECE1P42892 770 aa9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 KPNA1P52294 538 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 IL13RA1P78552 427 aa9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 ALDH6A1Q02252 535 aaKnown RBP9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 SART3Q15020 963 aaKnown RBP9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 KANK2Q63ZY3 851 aa9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 DDX46Q7L014 1031 aaKnown RBP9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 AFAP1L2Q8N4X5 818 aa9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 OR10A5Q9H207 317 aa9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 FTSJ1Q9UET6 329 aa9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 ARHGEF11O15085 1522 aa9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 PHLDB1Q86UU1 1377 aa9.49□□□□□ -0.89
TRAPPC11-206ENST00000509857 SUPT6HQ7KZ85 1726 aaKnown RBP9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 H0Y858 1186 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms