RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 MYCT1Q8N699 235 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 PIGOQ8TEQ8 1089 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 HERC5Q9UII4 1024 aaKnown RBP19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 NAGPAQ9UK23 515 aa19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 PACSIN2Q9UNF0 486 aaPredicted RBP19.62■□□□□ 0.73
CCHCR1-228ENST00000509552 HEXIM1O94992 359 aaKnown RBP19.61■□□□□ 0.73
CCHCR1-228ENST00000509552 TNNC1P63316 161 aa19.61■□□□□ 0.73
CCHCR1-228ENST00000509552 PPFIA1Q13136 1202 aa19.61■□□□□ 0.73
CCHCR1-228ENST00000509552 PAK2Q13177 524 aa19.61■□□□□ 0.73
CCHCR1-228ENST00000509552 AOC3Q16853 763 aa19.61■□□□□ 0.73
CCHCR1-228ENST00000509552 MSL1Q68DK7 614 aa19.61■□□□□ 0.73
CCHCR1-228ENST00000509552 EHMT1Q9H9B1 1298 aa19.61■□□□□ 0.73
CCHCR1-228ENST00000509552 POLD4Q9HCU8 107 aa19.61■□□□□ 0.73
CCHCR1-228ENST00000509552 GDF3Q9NR23 364 aa19.61■□□□□ 0.73
CCHCR1-228ENST00000509552 COL2A1P02458 1487 aaPredicted RBP19.61■□□□□ 0.73
CCHCR1-228ENST00000509552 SFI1A8K8P3 1242 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 GCOM1H8Y6P7 765 aaPredicted RBP19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 TULP2O00295 520 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 POLR2MP0CAP2 368 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 PSMC2P35998 433 aaKnown RBP19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 SLC15A2Q16348 729 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 LRRC31Q6UY01 552 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 RBM46Q8TBY0 533 aaKnown RBP19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 DYDC2Q96IM9 177 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 PRMT6Q96LA8 375 aaPredicted RBP19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 INPP4AQ96PE3 977 aaPredicted RBP19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 EPB41L5Q9HCM4 733 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 GOPCQ9HD26 462 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 TMOD2Q9NZR1 351 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 KIF13BQ9NQT8 1826 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 CHMP2AO43633 222 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 SLITRK3O94933 977 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 GLI1P08151 1106 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 HSPA1LP34931 641 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 GUCY2DQ02846 1103 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 KCNA1Q09470 495 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 RRP1BQ14684 758 aaKnown RBP19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 KRT12Q99456 494 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 PARVGQ9HBI0 331 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 BRWD3Q6RI45 1802 aa19.6■□□□□ 0.73
CCHCR1-228ENST00000509552 KCNK3O14649 394 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 TGFB1I1O43294 461 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 PPP2R5CQ13362 524 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 STXBP4Q6ZWJ1 553 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 FAM186BQ8IYM0 893 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 USP38Q8NB14 1042 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 LMBR1Q8WVP7 490 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 IFT81Q8WYA0 676 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 PBKQ96KB5 322 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 SH3GL2Q99962 352 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 WDR18Q9BV38 432 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 SIX2Q9NPC8 291 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 ATP8B3O60423 1300 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 SHTN1A0MZ66 631 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 PLSCR1O15162 318 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 PSMD10O75832 226 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 FERP16591 822 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 ECE1P42892 770 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 PRELPP51888 382 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 JAM2P57087 298 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 NFIL3Q16649 462 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 C1orf186Q6ZWK4 172 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 TRERF1Q96PN7 1200 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 SEL1LQ9UBV2 794 aa19.59■□□□□ 0.73
CCHCR1-228ENST00000509552 GAS7O60861 476 aa19.58■□□□□ 0.73
CCHCR1-228ENST00000509552 KIF4AO95239 1232 aa19.58■□□□□ 0.73
CCHCR1-228ENST00000509552 MUTP22033 750 aa19.58■□□□□ 0.73
CCHCR1-228ENST00000509552 NMT1P30419 496 aaKnown RBP19.58■□□□□ 0.73
CCHCR1-228ENST00000509552 STAT1P42224 750 aa19.58■□□□□ 0.73
CCHCR1-228ENST00000509552 RNASE9P60153 205 aaKnown RBP19.58■□□□□ 0.73
CCHCR1-228ENST00000509552 TSEN2Q8NCE0 465 aaKnown RBP19.58■□□□□ 0.73
CCHCR1-228ENST00000509552 SLC5A5Q92911 643 aa19.58■□□□□ 0.73
CCHCR1-228ENST00000509552 CNKSR1Q969H4 720 aa19.58■□□□□ 0.73
CCHCR1-228ENST00000509552 BCAS3Q9H6U6 928 aa19.58■□□□□ 0.73
CCHCR1-228ENST00000509552 NFU1Q9UMS0 254 aa19.58■□□□□ 0.73
CCHCR1-228ENST00000509552 TMX2Q9Y320 296 aa19.58■□□□□ 0.73
CCHCR1-228ENST00000509552 CLSTN1O94985 981 aa19.58■□□□□ 0.72
CCHCR1-228ENST00000509552 H2AFZP0C0S5 128 aa19.58■□□□□ 0.72
CCHCR1-228ENST00000509552 CARSP49589 748 aaKnown RBP19.58■□□□□ 0.72
CCHCR1-228ENST00000509552 CCDC174Q6PII3 467 aa19.58■□□□□ 0.72
CCHCR1-228ENST00000509552 H2AFVQ71UI9 128 aa19.58■□□□□ 0.72
CCHCR1-228ENST00000509552 HS2ST1Q7LGA3 356 aa19.58■□□□□ 0.72
CCHCR1-228ENST00000509552 CHURC1Q8WUH1 139 aa19.58■□□□□ 0.72
CCHCR1-228ENST00000509552 NACC1Q96RE7 527 aa19.58■□□□□ 0.72
CCHCR1-228ENST00000509552 MKNK1Q9BUB5 465 aa19.58■□□□□ 0.72
CCHCR1-228ENST00000509552 TSPYL1Q9H0U9 437 aa19.58■□□□□ 0.72
CCHCR1-228ENST00000509552 UBE4BO95155 1302 aa19.57■□□□□ 0.72
CCHCR1-228ENST00000509552 APBA3O96018 575 aa19.57■□□□□ 0.72
CCHCR1-228ENST00000509552 BORCS6Q96GS4 357 aa19.57■□□□□ 0.72
CCHCR1-228ENST00000509552 INTUQ9ULD6 942 aa19.57■□□□□ 0.72
CCHCR1-228ENST00000509552 MRPL11Q9Y3B7 192 aaKnown RBP19.57■□□□□ 0.72
CCHCR1-228ENST00000509552 ZMYM2Q9UBW7 1377 aa19.57■□□□□ 0.72
CCHCR1-228ENST00000509552 WDR11Q9BZH6 1224 aa19.57■□□□□ 0.72
CCHCR1-228ENST00000509552 KCND2Q9NZV8 630 aa19.57■□□□□ 0.72
CCHCR1-228ENST00000509552 FRMD4BQ9Y2L6 1034 aa19.57■□□□□ 0.72
CCHCR1-228ENST00000509552 SLX4Q8IY92 1834 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 A0A0A6YYK5 440 aaPredicted RBP19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 TCP10L2B9ZVM9 353 aa19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 SHOX2O60902 331 aaPredicted RBP19.56■□□□□ 0.72
CCHCR1-228ENST00000509552 CEP55Q53EZ4 464 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms