RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 RMDN2Q96LZ7 410 aa2.56□□□□□ -2
CAST-226ENST00000509529 KRTAP3-1Q9BYR8 98 aa2.56□□□□□ -2
CAST-226ENST00000509529 GPR62Q9BZJ7 368 aa2.56□□□□□ -2
CAST-226ENST00000509529 TRIM6Q9C030 488 aaPredicted RBP2.56□□□□□ -2
CAST-226ENST00000509529 NIF3L1Q9GZT8 377 aa2.56□□□□□ -2
CAST-226ENST00000509529 BHMT2Q9H2M3 363 aa2.56□□□□□ -2
CAST-226ENST00000509529 CWC25Q9NXE8 425 aaPredicted RBP2.56□□□□□ -2
CAST-226ENST00000509529 CACNA1FO60840 1977 aa2.56□□□□□ -2
CAST-226ENST00000509529 NALCNQ8IZF0 1738 aa2.56□□□□□ -2
CAST-226ENST00000509529 CPS1P31327 1500 aa2.56□□□□□ -2
CAST-226ENST00000509529 E7ENQ6 273 aa2.56□□□□□ -2
CAST-226ENST00000509529 IKBKBO14920 756 aa2.56□□□□□ -2
CAST-226ENST00000509529 ERC2O15083 957 aa2.56□□□□□ -2
CAST-226ENST00000509529 OPA1O60313 960 aa2.56□□□□□ -2
CAST-226ENST00000509529 VIMP08670 466 aaKnown RBP2.56□□□□□ -2
CAST-226ENST00000509529 TRIM27P14373 513 aa2.56□□□□□ -2
CAST-226ENST00000509529 GSPT1P15170 499 aaKnown RBP2.56□□□□□ -2
CAST-226ENST00000509529 CDK8P49336 464 aa2.56□□□□□ -2
CAST-226ENST00000509529 RAB27AP51159 221 aa2.56□□□□□ -2
CAST-226ENST00000509529 PLCB3Q01970 1234 aa2.56□□□□□ -2
CAST-226ENST00000509529 DUSP4Q13115 394 aa2.56□□□□□ -2
CAST-226ENST00000509529 ELF2Q15723 593 aa2.56□□□□□ -2
CAST-226ENST00000509529 CRB2Q5IJ48 1285 aa2.56□□□□□ -2
CAST-226ENST00000509529 AP1ARQ63HQ0 302 aa2.56□□□□□ -2
CAST-226ENST00000509529 C6orf89Q6UWU4 347 aa2.56□□□□□ -2
CAST-226ENST00000509529 ARMC9Q7Z3E5 817 aa2.56□□□□□ -2
CAST-226ENST00000509529 USP48Q86UV5 1035 aa2.56□□□□□ -2
CAST-226ENST00000509529 CD302Q8IX05 232 aa2.56□□□□□ -2
CAST-226ENST00000509529 RPAP2Q8IXW5 612 aaPredicted RBP2.56□□□□□ -2
CAST-226ENST00000509529 SAMD3Q8N6K7 520 aa2.56□□□□□ -2
CAST-226ENST00000509529 TEX9Q8N6V9 391 aa2.56□□□□□ -2
CAST-226ENST00000509529 NCSTNQ92542 709 aa2.56□□□□□ -2
CAST-226ENST00000509529 SYTL4Q96C24 671 aaPredicted RBP2.56□□□□□ -2
CAST-226ENST00000509529 G6PC3Q9BUM1 346 aa2.56□□□□□ -2
CAST-226ENST00000509529 MRIQ9BWK5 157 aa2.56□□□□□ -2
CAST-226ENST00000509529 ARFGAP3Q9NP61 516 aa2.56□□□□□ -2
CAST-226ENST00000509529 SPATS2LQ9NUQ6 558 aaKnown RBP2.56□□□□□ -2
CAST-226ENST00000509529 CHCHD3Q9NX63 227 aaKnown RBP2.56□□□□□ -2
CAST-226ENST00000509529 QPCTLQ9NXS2 382 aa2.56□□□□□ -2
CAST-226ENST00000509529 NR2E3Q9Y5X4 410 aa2.56□□□□□ -2
CAST-226ENST00000509529 UBN2Q6ZU65 1347 aa2.56□□□□□ -2
CAST-226ENST00000509529 ADCY9O60503 1353 aa2.56□□□□□ -2
CAST-226ENST00000509529 C5orf60A6NFR6 353 aa2.55□□□□□ -2
CAST-226ENST00000509529 PATL2C9JE40 543 aaKnown RBP2.55□□□□□ -2
CAST-226ENST00000509529 U2SURPO15042 1029 aaKnown RBP2.55□□□□□ -2
CAST-226ENST00000509529 ZBED4O75132 1171 aa2.55□□□□□ -2
CAST-226ENST00000509529 ERLIN1O75477 346 aa2.55□□□□□ -2
CAST-226ENST00000509529 DNAJC8O75937 253 aaPredicted RBP2.55□□□□□ -2
CAST-226ENST00000509529 CDKL5O76039 1030 aa2.55□□□□□ -2
CAST-226ENST00000509529 ERLIN2O94905 339 aa2.55□□□□□ -2
CAST-226ENST00000509529 GSTA1P08263 222 aa2.55□□□□□ -2
CAST-226ENST00000509529 PAEPP09466 180 aa2.55□□□□□ -2
CAST-226ENST00000509529 NF2P35240 595 aa2.55□□□□□ -2
CAST-226ENST00000509529 SLURP1P55000 103 aa2.55□□□□□ -2
CAST-226ENST00000509529 ROR2Q01974 943 aaKnown RBP2.55□□□□□ -2
CAST-226ENST00000509529 TEKQ02763 1124 aa2.55□□□□□ -2
CAST-226ENST00000509529 PABPC4Q13310 644 aaKnown RBP eCLIP2.55□□□□□ -2
CAST-226ENST00000509529 MYBPC2Q14324 1141 aa2.55□□□□□ -2
CAST-226ENST00000509529 MAP3K11Q16584 847 aa2.55□□□□□ -2
CAST-226ENST00000509529 E4F1Q66K89 784 aaPredicted RBP2.55□□□□□ -2
CAST-226ENST00000509529 TTC19Q6DKK2 380 aaPredicted RBP2.55□□□□□ -2
CAST-226ENST00000509529 TMED8Q6PL24 325 aaPredicted RBP2.55□□□□□ -2
CAST-226ENST00000509529 NXPE4Q6UWF7 544 aa2.55□□□□□ -2
CAST-226ENST00000509529 DTWD2Q8NBA8 298 aa2.55□□□□□ -2
CAST-226ENST00000509529 MIPOL1Q8TD10 442 aa2.55□□□□□ -2
CAST-226ENST00000509529 CACTINQ8WUQ7 758 aaKnown RBP2.55□□□□□ -2
CAST-226ENST00000509529 ZKSCAN4Q969J2 545 aaPredicted RBP2.55□□□□□ -2
CAST-226ENST00000509529 PPP2R3CQ969Q6 453 aa2.55□□□□□ -2
CAST-226ENST00000509529 PPP1R13BQ96KQ4 1090 aa2.55□□□□□ -2
CAST-226ENST00000509529 GDAP1L1Q96MZ0 367 aa2.55□□□□□ -2
CAST-226ENST00000509529 LZTS2Q9BRK4 669 aa2.55□□□□□ -2
CAST-226ENST00000509529 SRCIN1Q9C0H9 1055 aa2.55□□□□□ -2
CAST-226ENST00000509529 VCPKMTQ9H867 229 aa2.55□□□□□ -2
CAST-226ENST00000509529 SMPD4Q9NXE4 827 aa2.55□□□□□ -2
CAST-226ENST00000509529 RPL26L1Q9UNX3 145 aaKnown RBP2.55□□□□□ -2
CAST-226ENST00000509529 MTMR7Q9Y216 660 aa2.55□□□□□ -2
CAST-226ENST00000509529 RIMBP3CA6NJZ7 1639 aa2.55□□□□□ -2
CAST-226ENST00000509529 RIMBP3BA6NNM3 1639 aa2.55□□□□□ -2
CAST-226ENST00000509529 ALKQ9UM73 1620 aa2.55□□□□□ -2
CAST-226ENST00000509529 ABCC12Q96J65 1359 aa2.55□□□□□ -2
CAST-226ENST00000509529 AGLP35573 1532 aa2.55□□□□□ -2
CAST-226ENST00000509529 GPR75-ASB3A0A0A6YYF3 556 aa2.55□□□□□ -2
CAST-226ENST00000509529 PLEKHD1A6NEE1 506 aa2.55□□□□□ -2
CAST-226ENST00000509529 TMEM88BA6NKF7 163 aa2.55□□□□□ -2
CAST-226ENST00000509529 BTBD19C9JJ37 291 aa2.55□□□□□ -2
CAST-226ENST00000509529 ZSCAN9O15535 394 aaPredicted RBP2.55□□□□□ -2
CAST-226ENST00000509529 NDUFB5O43674 189 aa2.55□□□□□ -2
CAST-226ENST00000509529 USP2O75604 605 aaPredicted RBP2.55□□□□□ -2
CAST-226ENST00000509529 NPTXRO95502 500 aa2.55□□□□□ -2
CAST-226ENST00000509529 F13A1P00488 732 aa2.55□□□□□ -2
CAST-226ENST00000509529 MYBL2P10244 700 aa2.55□□□□□ -2
CAST-226ENST00000509529 PIM1P11309 404 aaPredicted RBP2.55□□□□□ -2
CAST-226ENST00000509529 C6P13671 934 aa2.55□□□□□ -2
CAST-226ENST00000509529 FERP16591 822 aa2.55□□□□□ -2
CAST-226ENST00000509529 CASTP20810 708 aaKnown RBP2.55□□□□□ -2
CAST-226ENST00000509529 SYT1P21579 422 aa2.55□□□□□ -2
CAST-226ENST00000509529 PTGS1P23219 599 aa2.55□□□□□ -2
CAST-226ENST00000509529 GRK4P32298 578 aa2.55□□□□□ -2
CAST-226ENST00000509529 GCKP35557 465 aa2.55□□□□□ -2
CAST-226ENST00000509529 ETV3P41162 512 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms