RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 COLEC12Q5KU26 742 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 CCDC158Q5M9N0 1113 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 JAKMIP3Q5VZ66 844 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 SUGP1Q8IWZ8 645 aaKnown RBP5.28□□□□□ -1.56
NIPBL-206ENST00000509429 SAMD14Q8IZD0 417 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-206ENST00000509429 FAM26EQ8N5C1 309 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 ARL6IP6Q8N6S5 226 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 JMYQ8N9B5 988 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 TAF4BQ92750 862 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 TEKT1Q969V4 418 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 CENPTQ96BT3 561 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 VMP1Q96GC9 406 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 XPO4Q9C0E2 1151 aaKnown RBP5.28□□□□□ -1.56
NIPBL-206ENST00000509429 SEC61A2Q9H9S3 476 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 MED4Q9NPJ6 270 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 CHST12Q9NRB3 414 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 EID1Q9Y6B2 187 aa5.28□□□□□ -1.56
NIPBL-206ENST00000509429 CECR2Q9BXF3 1484 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 KIF21BO75037 1637 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 PRSS47A8MTI9 375 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 FOXN1O15353 648 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 CCP110O43303 1012 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 CAND2O75155 1236 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 BBOX1O75936 387 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 BPNT1O95861 308 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 HOXD10P28358 340 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 HOXC13P31276 330 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 STIP1P31948 543 aaKnown RBP5.27□□□□□ -1.57
NIPBL-206ENST00000509429 RBL2Q08999 1139 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 CCDC15Q0P6D6 951 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 BRSK2Q8IWQ3 736 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 KLHL36Q8N4N3 616 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 APPL2Q8NEU8 664 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 IL17DQ8TAD2 202 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 TSR2Q969E8 191 aaKnown RBP5.27□□□□□ -1.57
NIPBL-206ENST00000509429 RNPC3Q96LT9 517 aaKnown RBP5.27□□□□□ -1.57
NIPBL-206ENST00000509429 BACH2Q9BYV9 841 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 KMT5AQ9NQR1 393 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 PRKAB1Q9Y478 270 aa5.27□□□□□ -1.57
NIPBL-206ENST00000509429 PEG3Q9GZU2 1588 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 CEP162Q5TB80 1403 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 ANKRD18BA2A2Z9 1011 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 SLC26A4O43511 780 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 GEMIN4P57678 1058 aaKnown RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 TOMM20Q15388 145 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 MAP3K11Q16584 847 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 PARP10Q53GL7 1025 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 ZCCHC8Q6NZY4 707 aaKnown RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 SYCE2Q6PIF2 218 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 Q6ZPA2 131 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 MICALCLQ6ZW33 695 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 ZC3H18Q86VM9 953 aaKnown RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 WDR75Q8IWA0 830 aaKnown RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 RAVER1Q8IY67 606 aaKnown RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 ELOA2Q8IYF1 753 aaPredicted RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 TDRD7Q8NHU6 1098 aaKnown RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 ZFPM2Q8WW38 1151 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 PAWRQ96IZ0 340 aaKnown RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 CDK5RAP3Q96JB5 506 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 SERINC2Q96SA4 455 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 SRRTQ9BXP5 876 aaKnown RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 RWDD1Q9H446 243 aaPredicted RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 ARNT2Q9HBZ2 717 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 SLC2A4RGQ9NR83 387 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 PRR13Q9NZ81 148 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 EVLQ9UI08 416 aaPredicted RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 XPO7Q9UIA9 1087 aaKnown RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 FBXO2Q9UK22 296 aaPredicted RBP5.26□□□□□ -1.57
NIPBL-206ENST00000509429 GOLGA3Q08378 1498 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 UNC13AQ9UPW8 1703 aa5.26□□□□□ -1.57
NIPBL-206ENST00000509429 SHTN1A0MZ66 631 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 FAM25EA8MYX2 175 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 TBC1D8O95759 1140 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 ZSCAN20P17040 1043 aaPredicted RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 XBP1P17861 261 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 GPSM2P81274 684 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 MRPL58Q14197 206 aaKnown RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 FXNQ16595 210 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 FAM133BQ5BKY9 247 aaKnown RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 DNAJC21Q5F1R6 531 aaKnown RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 C10orf62Q5T681 223 aaPredicted RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 ACBD5Q5T8D3 534 aaPredicted RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 ANKRD45Q5TZF3 282 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 ARMC3Q5W041 872 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 CCDC84Q86UT8 332 aaPredicted RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 METTL16Q86W50 562 aaKnown RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 LZTR1Q8N653 840 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 GIMAP8Q8ND71 665 aaPredicted RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 PHC3Q8NDX5 983 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 MYRIPQ8NFW9 859 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 C17orf50Q8WW18 174 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 ZNF496Q96IT1 587 aaPredicted RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 SPAG5Q96R06 1193 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 GMLQ99445 158 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 TRIM6Q9C030 488 aaPredicted RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 ZNF700Q9H0M5 742 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 PNNQ9H307 717 aaKnown RBP5.25□□□□□ -1.57
NIPBL-206ENST00000509429 RMI1Q9H9A7 625 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 CAPN10Q9HC96 672 aa5.25□□□□□ -1.57
NIPBL-206ENST00000509429 GINM1Q9NU53 330 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms