RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 PLVAPQ9BX97 442 aa12.39□□□□□ -0.43
RNF4-212ENST00000509258 TM6SF1Q9BZW5 370 aa12.39□□□□□ -0.43
RNF4-212ENST00000509258 CDHR5Q9HBB8 845 aa12.39□□□□□ -0.43
RNF4-212ENST00000509258 C6orf50Q9HD87 102 aa12.39□□□□□ -0.43
RNF4-212ENST00000509258 PPP4R2Q9NY27 417 aa12.39□□□□□ -0.43
RNF4-212ENST00000509258 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
RNF4-212ENST00000509258 CYP46A1Q9Y6A2 500 aa12.39□□□□□ -0.43
RNF4-212ENST00000509258 IPO5O00410 1097 aaKnown RBP12.38□□□□□ -0.43
RNF4-212ENST00000509258 EPB41L2O43491 1005 aaKnown RBP12.38□□□□□ -0.43
RNF4-212ENST00000509258 DCXO43602 365 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 LARGE1O95461 756 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 SEC24BO95487 1268 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 NEFLP07196 543 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 CD52P31358 61 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 CIITAP33076 1130 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 MRPS6P82932 125 aaKnown RBP12.38□□□□□ -0.43
RNF4-212ENST00000509258 ZP2Q05996 745 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 SCRN1Q12765 414 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 CSPP1Q1MSJ5 1256 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 PRR16Q569H4 304 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 IER5Q5VY09 327 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 FAM43BQ6ZT52 329 aaPredicted RBP12.38□□□□□ -0.43
RNF4-212ENST00000509258 PLPPR4Q7Z2D5 763 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 ZNF577Q9BSK1 485 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 FTHL17Q9BXU8 183 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 TPCN1Q9ULQ1 816 aa12.38□□□□□ -0.43
RNF4-212ENST00000509258 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 ENPP3O14638 875 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 GRM6O15303 877 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 MSH4O15457 936 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 CTDNEP1O95476 244 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 TDP2O95551 362 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 MMP1P03956 469 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 UGCGQ16739 394 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 CTC1Q2NKJ3 1217 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 SWSAP1Q6NVH7 229 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 MTHFD1LQ6UB35 978 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 ADHFE1Q8IWW8 467 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 CMTR2Q8IYT2 770 aaKnown RBP12.37□□□□□ -0.43
RNF4-212ENST00000509258 TMEM40Q8WWA1 233 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 PPP2R3CQ969Q6 453 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 ZNF689Q96CS4 500 aaPredicted RBP12.37□□□□□ -0.43
RNF4-212ENST00000509258 ZNF274Q96GC6 653 aaPredicted RBP12.37□□□□□ -0.43
RNF4-212ENST00000509258 POP1Q99575 1024 aaKnown RBP12.37□□□□□ -0.43
RNF4-212ENST00000509258 TMX1Q9H3N1 280 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 PDRG1Q9NUG6 133 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
RNF4-212ENST00000509258 PCDHA2Q9Y5H9 948 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 SQORQ9Y6N5 450 aa12.37□□□□□ -0.43
RNF4-212ENST00000509258 BACH1O14867 736 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 ZNF862O60290 1169 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 DGKIO75912 1065 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 KLRC1P26715 233 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 GATMP50440 423 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 SLC26A2P50443 739 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 SSRP1Q08945 709 aaKnown RBP12.36□□□□□ -0.43
RNF4-212ENST00000509258 HYAL1Q12794 435 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 SMAD2Q15796 467 aaKnown RBP12.36□□□□□ -0.43
RNF4-212ENST00000509258 TMEM266Q2M3C6 531 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 ODR4Q5SWX8 454 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 PDXDC2PQ6P474 469 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 TRMT1LQ7Z2T5 733 aaKnown RBP12.36□□□□□ -0.43
RNF4-212ENST00000509258 NPAS4Q8IUM7 802 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 CRIPAKQ8N1N5 446 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 ATP8B4Q8TF62 1192 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 P2RX5Q93086 422 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 PPP1R16BQ96T49 567 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 ZNF302Q9NR11 478 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 TCEAL9Q9UHQ7 104 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 KCNJ14Q9UNX9 436 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 TRPV2Q9Y5S1 764 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 IGSF9BQ9UPX0 1349 aa12.36□□□□□ -0.43
RNF4-212ENST00000509258 FAM205CA6NFA0 338 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 C19orf67A6NJJ6 358 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 MGEA5O60502 916 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 C22orf31O95567 290 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 STAG3L1P0CL83 205 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 GNA11P29992 359 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 LTBRP36941 435 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 AK2P54819 239 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 NLRP5P59047 1200 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 AKAP17AQ02040 695 aaKnown RBP12.35□□□□□ -0.43
RNF4-212ENST00000509258 ST3GAL1Q11201 340 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 PAK2Q13177 524 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 NAALADL2Q58DX5 795 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 EARS2Q5JPH6 523 aaKnown RBP12.35□□□□□ -0.43
RNF4-212ENST00000509258 MCTP2Q6DN12 878 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 KIAA0319LQ8IZA0 1049 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 CCDC148Q8NFR7 591 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 OXER1Q8TDS5 423 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 TBCKQ8TEA7 893 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 CCDC12Q8WUD4 166 aaPredicted RBP12.35□□□□□ -0.43
RNF4-212ENST00000509258 SLC5A5Q92911 643 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 UNC45AQ9H3U1 944 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 SH3GLB2Q9NR46 395 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 GABBR1Q9UBS5 961 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 PCDHA4Q9UN74 947 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 PLAGL2Q9UPG8 496 aa12.35□□□□□ -0.43
RNF4-212ENST00000509258 MAFBQ9Y5Q3 323 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms