RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 USP11P51784 963 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 DRP2Q13474 957 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 TRIM29Q14134 588 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 NONOQ15233 471 aaKnown RBP eCLIP9.79□□□□□ -0.84
SNCA-211ENST00000508895 TMEM266Q2M3C6 531 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 LETM2Q2VYF4 491 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 FBXO47Q5MNV8 452 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 MCTP2Q6DN12 878 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 ZNF746Q6NUN9 644 aaPredicted RBP9.79□□□□□ -0.84
SNCA-211ENST00000508895 PDXDC2PQ6P474 469 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 KRT25Q7Z3Z0 450 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 RPAINQ86UA6 219 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 KIAA0319LQ8IZA0 1049 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 LINC01465Q8N7H1 131 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 ZNF579Q8NAF0 562 aaKnown RBP9.79□□□□□ -0.84
SNCA-211ENST00000508895 ATP8B4Q8TF62 1192 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 TMX1Q9H3N1 280 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 FOXD4L1Q9NU39 408 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 VAV3Q9UKW4 847 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 PCDHA2Q9Y5H9 948 aa9.79□□□□□ -0.84
SNCA-211ENST00000508895 TCF20Q9UGU0 1960 aaKnown RBP9.78□□□□□ -0.84
SNCA-211ENST00000508895 TMEM265A0A087WTH1 108 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 A0A087WWV3 80 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 CCDC194A0A1B0GVG4 234 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 LINC01553A4QN01 128 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 ZBTB39O15060 712 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 LPXNO60711 386 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 BAIAP3O94812 1187 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 LINC00271P0C7V0 271 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 ACTN1P12814 892 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 FOSL2P15408 326 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 CD52P31358 61 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 MRPS6P82932 125 aaKnown RBP9.78□□□□□ -0.84
SNCA-211ENST00000508895 SETQ01105 290 aaPredicted RBP9.78□□□□□ -0.84
SNCA-211ENST00000508895 SPIRE1Q08AE8 756 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 RAB30Q15771 203 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 LRCH2Q5VUJ6 765 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 PPP2R2DQ66LE6 453 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 MIS18BP1Q6P0N0 1132 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 MAFAQ8NHW3 353 aaPredicted RBP9.78□□□□□ -0.84
SNCA-211ENST00000508895 SLC9A7Q96T83 725 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 AZI2Q9H6S1 392 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 BRMS1Q9HCU9 246 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 KCNMB3Q9NPA1 279 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 DISC1Q9NRI5 854 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 TBC1D22BQ9NU19 505 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 MSRAQ9UJ68 235 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 PCDHA10Q9Y5I2 948 aa9.78□□□□□ -0.84
SNCA-211ENST00000508895 FNDC1Q4ZHG4 1894 aaPredicted RBP9.78□□□□□ -0.84
SNCA-211ENST00000508895 ABHD14A-ACY1A0A1B0GW23 586 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 RRN3P2A6NIE6 340 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 ENPP3O14638 875 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 TLL1O43897 1013 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 HBP1O60381 514 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 GAS7O60861 476 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 GJB5O95377 273 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 VTNP04004 478 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 GNAT1P11488 350 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 GATMP50440 423 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 CLCN3P51790 818 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 PRKCEQ02156 737 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 IKBKEQ14164 716 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 TARBP2Q15633 366 aaKnown RBP9.77□□□□□ -0.85
SNCA-211ENST00000508895 CCDC85BQ15834 202 aaPredicted RBP9.77□□□□□ -0.85
SNCA-211ENST00000508895 MYOCDQ8IZQ8 938 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 CRIPAKQ8N1N5 446 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 LRRC71Q8N4P6 559 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 BANK1Q8NDB2 785 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 PHOSPHO2Q8TCD6 241 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 GDPD5Q8WTR4 605 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 PPM1EQ8WY54 764 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 RIT2Q99578 217 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 C17orf80Q9BSJ5 609 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 MTIF3Q9H2K0 278 aaKnown RBP9.77□□□□□ -0.85
SNCA-211ENST00000508895 TMEM60Q9H2L4 133 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 SLC28A3Q9HAS3 691 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 DDX25Q9UHL0 483 aaKnown RBP9.77□□□□□ -0.85
SNCA-211ENST00000508895 KIF3AQ9Y496 699 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 TRANK1O15050 2925 aa9.77□□□□□ -0.85
SNCA-211ENST00000508895 SMIM35A0A1B0GVV1 85 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 CAND2O75155 1236 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 GPR32O75388 356 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 UPP2O95045 317 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 PSAPP07602 524 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 FGFR4P22455 802 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 U2AF2P26368 475 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNCA-211ENST00000508895 KCNJ6P48051 423 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 NPEPPSP55786 919 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 HTRA4P83105 476 aaPredicted RBP9.76□□□□□ -0.85
SNCA-211ENST00000508895 KRT76Q01546 638 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 NBR1Q14596 966 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 SAFBQ15424 915 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNCA-211ENST00000508895 KIZQ2M2Z5 673 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 FAM160B1Q5W0V3 765 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 PLA2G4FQ68DD2 849 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 MOXD1Q6UVY6 613 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 MIER3Q7Z3K6 550 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 NEK8Q86SG6 692 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 NOSTRINQ8IVI9 506 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 ARNTL2Q8WYA1 636 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms