RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SSU72P8A0A1W2PR75 194 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 A6NNZ2 444 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 IPO5O00410 1097 aaKnown RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 ZBTB39O15060 712 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 PJA2O43164 708 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 KRT18P05783 430 aaKnown RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 RPS6P62753 249 aaKnown RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 IRX5P78411 483 aaPredicted RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 PPP2R5CQ13362 524 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 TUBB8Q3ZCM7 444 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 HERC4Q5GLZ8 1057 aaPredicted RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 SYT2Q8N9I0 419 aaPredicted RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 SYTL5Q8TDW5 730 aaPredicted RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 AFAP1L1Q8TED9 768 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 L3MBTL3Q96JM7 780 aaPredicted RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 HSD17B14Q9BPX1 270 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 REEP2Q9BRK0 252 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 IFIH1Q9BYX4 1025 aaKnown RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 WDR11Q9BZH6 1224 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 LACRTQ9GZZ8 138 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 HDAC6Q9UBN7 1215 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 HPCAL4Q9UM19 191 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 SNX12Q9UMY4 172 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 PCDHA13Q9Y5I0 950 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 POLR2AP24928 1970 aaKnown RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 RPTORQ8N122 1335 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 PHIPQ8WWQ0 1821 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 DDX39AO00148 427 aaKnown RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 SLITRK3O94933 977 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 EIF2AK2P19525 551 aaKnown RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 TNNT3P45378 269 aaPredicted RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 CASP5P51878 434 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 SETQ01105 290 aaPredicted RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 GLE1Q53GS7 698 aaKnown RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 MCF2L2Q86YR7 1114 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 TPH2Q8IWU9 490 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 CCDC65Q8IXS2 484 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 MYOCDQ8IZQ8 938 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 SYN2Q92777 582 aaPredicted RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 DYDC2Q96IM9 177 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 TRERF1Q96PN7 1200 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 MXRA8Q9BRK3 442 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 POLR3CQ9BUI4 534 aaPredicted RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 UNC45AQ9H3U1 944 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 DEF6Q9H4E7 631 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 BCAS3Q9H6U6 928 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 SUGCTQ9HAC7 445 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 KCNH7Q9NS40 1196 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 WRAP73Q9P2S5 460 aaPredicted RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 FAM184BQ9ULE4 1060 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 SIK3Q9Y2K2 1263 aa12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 CTDP1Q9Y5B0 961 aaPredicted RBP12.1□□□□□ -0.47
SH3RF1-203ENST00000508685 RLFQ13129 1914 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 FRMD3A2A2Y4 597 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 IQCA1LA6NCM1 817 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 RSPH10B2B2RC85 870 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 ZBED4O75132 1171 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 GNA14O95837 355 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 RSPH10BP0C881 870 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 PAFAH1B1P43034 410 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 MRPS9P82933 396 aaKnown RBP12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 GHRHRQ02643 423 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 GIT2Q14161 759 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 NSMFQ6X4W1 530 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 LRRC55Q6ZSA7 311 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 NELFCDQ8IXH7 590 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 TAAR1Q96RJ0 339 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 RUSC1Q9BVN2 902 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 RABGAP1Q9Y3P9 1069 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 HYOU1Q9Y4L1 999 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 PPP2R3BQ9Y5P8 575 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 PITPNM2Q9BZ72 1349 aa12.09□□□□□ -0.47
SH3RF1-203ENST00000508685 COL11A1P12107 1806 aaPredicted RBP12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 ADM5C9JUS6 153 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 AKR1B10O60218 316 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 N4BP1O75113 896 aaKnown RBP12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 RNF40O75150 1001 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 KLK7P49862 253 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 KIF11P52732 1056 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 GYS2P54840 703 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 ZCWPW2Q504Y3 356 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 SCFD1Q8WVM8 642 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 CAPZA3Q96KX2 299 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 FAM204AQ9H8W3 233 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 WDR90Q96KV7 1748 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 RCCD1A6NED2 376 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 OPA1O60313 960 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 SRGAP2O75044 1071 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 USP2O75604 605 aaPredicted RBP12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 TOMM70O94826 608 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 PRPF6O94906 941 aaKnown RBP12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 SYF2O95926 243 aaKnown RBP12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 TFRCP02786 760 aaKnown RBP12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 TNFRSF8P28908 595 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 ITGB3BPQ13352 177 aaPredicted RBP12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 VGLL4Q14135 290 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 TKFCQ3LXA3 575 aa12.08□□□□□ -0.48
SH3RF1-203ENST00000508685 SUPT20HL1Q3ZLR7 823 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms