RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 METTL13Q8N6R0 699 aa19.04■□□□□ 0.64
CLDND1-219ENST00000508659 MAGEB2O15479 319 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 QARSP47897 775 aaKnown RBP19.03■□□□□ 0.64
CLDND1-219ENST00000508659 TRAPPC10P48553 1259 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 RABGGTBP53611 331 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 DEFB103AP81534 67 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 SPIRE1Q08AE8 756 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 TBC1D8BQ0IIM8 1120 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 LPIN1Q14693 890 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 FBXO47Q5MNV8 452 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 TTC38Q5R3I4 469 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 HERC6Q8IVU3 1022 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 NME8Q8N427 588 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 MAP7D2Q96T17 732 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 LXNQ9BS40 222 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 TTYH1Q9H313 450 aaPredicted RBP19.03■□□□□ 0.64
CLDND1-219ENST00000508659 PCDHA12Q9UN75 941 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 GINS2Q9Y248 185 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 PCDHA11Q9Y5I1 949 aa19.03■□□□□ 0.64
CLDND1-219ENST00000508659 AMHP03971 560 aa19.02■□□□□ 0.64
CLDND1-219ENST00000508659 U2AF2P26368 475 aaKnown RBP eCLIP19.02■□□□□ 0.641e-9■■■□□ 14.8
CLDND1-219ENST00000508659 TMOD1P28289 359 aa19.02■□□□□ 0.64
CLDND1-219ENST00000508659 CLCN3P51790 818 aa19.02■□□□□ 0.64
CLDND1-219ENST00000508659 EPHA7Q15375 998 aa19.02■□□□□ 0.64
CLDND1-219ENST00000508659 MTERF2Q49AM1 385 aa19.02■□□□□ 0.64
CLDND1-219ENST00000508659 MCTP1Q6DN14 999 aa19.02■□□□□ 0.64
CLDND1-219ENST00000508659 TSHZ1Q6ZSZ6 1077 aa19.02■□□□□ 0.64
CLDND1-219ENST00000508659 OSBPL7Q9BZF2 842 aa19.02■□□□□ 0.64
CLDND1-219ENST00000508659 NKX2-4Q9H2Z4 354 aa19.02■□□□□ 0.64
CLDND1-219ENST00000508659 TTC12Q9H892 705 aaPredicted RBP19.02■□□□□ 0.64
CLDND1-219ENST00000508659 MTMR10Q9NXD2 777 aa19.02■□□□□ 0.64
CLDND1-219ENST00000508659 YBX2Q9Y2T7 364 aaKnown RBP19.02■□□□□ 0.64
CLDND1-219ENST00000508659 RBAK-RBAKDNI3L0D1 243 aa19.01■□□□□ 0.63
CLDND1-219ENST00000508659 P4HBP07237 508 aaKnown RBP19.01■□□□□ 0.63
CLDND1-219ENST00000508659 TXKP42681 527 aa19.01■□□□□ 0.63
CLDND1-219ENST00000508659 CYP4A11Q02928 519 aa19.01■□□□□ 0.63
CLDND1-219ENST00000508659 PPP2R2DQ66LE6 453 aa19.01■□□□□ 0.63
CLDND1-219ENST00000508659 KIAA0319LQ8IZA0 1049 aa19.01■□□□□ 0.63
CLDND1-219ENST00000508659 MYOCDQ8IZQ8 938 aa19.01■□□□□ 0.63
CLDND1-219ENST00000508659 USP38Q8NB14 1042 aa19.01■□□□□ 0.63
CLDND1-219ENST00000508659 ZBED2Q9BTP6 218 aa19.01■□□□□ 0.63
CLDND1-219ENST00000508659 CELF4Q9BZC1 486 aaKnown RBP19.01■□□□□ 0.63
CLDND1-219ENST00000508659 ZNF576Q9H609 170 aa19.01■□□□□ 0.63
CLDND1-219ENST00000508659 SLC28A3Q9HAS3 691 aa19.01■□□□□ 0.63
CLDND1-219ENST00000508659 AKT3Q9Y243 479 aa19.01■□□□□ 0.63
CLDND1-219ENST00000508659 KAT6AQ92794 2004 aa19.01■□□□□ 0.63
CLDND1-219ENST00000508659 KDM3AQ9Y4C1 1321 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 SIP14410 1827 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 TMEM150BA6NC51 233 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 TLL1O43897 1013 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 OR52Z1P0C646 297 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 PAK2Q13177 524 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 ZNF174Q15697 407 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 PLA2G4FQ68DD2 849 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 LRRC71Q8N4P6 559 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 NEK9Q8TD19 979 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 MTMR9Q96QG7 549 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 PPP1R16BQ96T49 567 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 NIFKQ9BYG3 293 aaKnown RBP19■□□□□ 0.63
CLDND1-219ENST00000508659 TMEM60Q9H2L4 133 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 SEMA6BQ9H3T3 888 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 SQORQ9Y6N5 450 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 CDH23Q9H251 3354 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 TET1Q8NFU7 2136 aa19■□□□□ 0.63
CLDND1-219ENST00000508659 POTEMA6NI47 508 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 DDX11L8A8MPP1 907 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 VTNP04004 478 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 CA3P07451 260 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 MYOGP15173 224 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 CD52P31358 61 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 MKRN4PQ13434 485 aaPredicted RBP18.99■□□□□ 0.63
CLDND1-219ENST00000508659 CUL4AQ13619 759 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 KIZQ2M2Z5 673 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 EFCAB12Q6NXP0 572 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.99■□□□□ 0.63
CLDND1-219ENST00000508659 ANO5Q75V66 913 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 TMCO2Q7Z6W1 182 aaPredicted RBP18.99■□□□□ 0.63
CLDND1-219ENST00000508659 DYDC2Q96IM9 177 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 GUCD1Q96NT3 240 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 SH2D3AQ9BRG2 576 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 ZSWIM4Q9H7M6 989 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 SUGCTQ9HAC7 445 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 RGL1Q9NZL6 768 aa18.99■□□□□ 0.63
CLDND1-219ENST00000508659 K7ELQ4 463 aaPredicted RBP18.98■□□□□ 0.63
CLDND1-219ENST00000508659 STBD1O95210 358 aa18.98■□□□□ 0.63
CLDND1-219ENST00000508659 GJB5O95377 273 aa18.98■□□□□ 0.63
CLDND1-219ENST00000508659 YWHABP31946 246 aaKnown RBP18.98■□□□□ 0.63
CLDND1-219ENST00000508659 CTTNQ14247 550 aaKnown RBP18.98■□□□□ 0.63
CLDND1-219ENST00000508659 NBR1Q14596 966 aa18.98■□□□□ 0.63
CLDND1-219ENST00000508659 TARBP2Q15633 366 aaKnown RBP18.98■□□□□ 0.63
CLDND1-219ENST00000508659 TMEM266Q2M3C6 531 aa18.98■□□□□ 0.63
CLDND1-219ENST00000508659 LARP1BQ659C4 914 aaKnown RBP18.98■□□□□ 0.63
CLDND1-219ENST00000508659 FAM117BQ6P1L5 589 aa18.98■□□□□ 0.63
CLDND1-219ENST00000508659 C4orf19Q8IY42 314 aa18.98■□□□□ 0.63
CLDND1-219ENST00000508659 LINC01465Q8N7H1 131 aa18.98■□□□□ 0.63
CLDND1-219ENST00000508659 SCLT1Q96NL6 688 aa18.98■□□□□ 0.63
CLDND1-219ENST00000508659 OSMRQ99650 979 aa18.98■□□□□ 0.63
CLDND1-219ENST00000508659 EIF2AK1Q9BQI3 630 aaKnown RBP18.98■□□□□ 0.63
CLDND1-219ENST00000508659 AGO3Q9H9G7 860 aaKnown RBP18.98■□□□□ 0.63
CLDND1-219ENST00000508659 CYP26B1Q9NR63 512 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms