RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 F13A1P00488 732 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 ACTN1P12814 892 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 XRCC6P12956 609 aaKnown RBP eCLIP10.22□□□□□ -0.77
NUP54-207ENST00000508583 LONP1P36776 959 aaKnown RBP10.22□□□□□ -0.77
NUP54-207ENST00000508583 TXLNAP40222 546 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 RFC5P40937 340 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 MAGEA10P43363 369 aaPredicted RBP10.22□□□□□ -0.77
NUP54-207ENST00000508583 ADAM17P78536 824 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 NUCB2P80303 420 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
NUP54-207ENST00000508583 SF3A1Q15459 793 aaKnown RBP10.22□□□□□ -0.77
NUP54-207ENST00000508583 ODR4Q5SWX8 454 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 MTHFD1LQ6UB35 978 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 C4orf32Q8N8J7 132 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 BADQ92934 168 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 DYDC2Q96IM9 177 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 CDK5RAP3Q96JB5 506 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 NACC1Q96RE7 527 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 HSD17B14Q9BPX1 270 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 UBE2OQ9C0C9 1292 aaKnown RBP10.22□□□□□ -0.77
NUP54-207ENST00000508583 NT5C3AQ9H0P0 336 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 ANKEF1Q9NU02 776 aa10.22□□□□□ -0.77
NUP54-207ENST00000508583 TRIP12Q14669 1992 aaPredicted RBP10.22□□□□□ -0.77
NUP54-207ENST00000508583 TANC1Q9C0D5 1861 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 LOXHD1Q8IVV2 1947 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 VWA3AA6NCI4 1184 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 RSPH10B2B2RC85 870 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 ZNF862O60290 1169 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 EFCAB14O75071 495 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 SLITRK3O94933 977 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 IQCF3P0C7M6 154 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 RSPH10BP0C881 870 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 ATP4AP20648 1035 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 KLRC1P26715 233 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 CYP2C18P33260 490 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 CCT6AP40227 531 aaKnown RBP10.21□□□□□ -0.77
NUP54-207ENST00000508583 POLGP54098 1239 aaPredicted RBP10.21□□□□□ -0.77
NUP54-207ENST00000508583 ZNF200P98182 395 aaPredicted RBP10.21□□□□□ -0.77
NUP54-207ENST00000508583 CYP4A11Q02928 519 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 UGCGQ16739 394 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 MTERF2Q49AM1 385 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 MARCH8Q5T0T0 291 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 TRMT1LQ7Z2T5 733 aaKnown RBP10.21□□□□□ -0.77
NUP54-207ENST00000508583 METTL13Q8N6R0 699 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 USP38Q8NB14 1042 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 RASSF8Q8NHQ8 419 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 KCNG4Q8TDN1 519 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 SNX29Q8TEQ0 813 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 TCP11Q8WWU5 503 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 CEP170P1Q96L14 293 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 GDF15Q99988 308 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 IL23AQ9NPF7 189 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 CYP26B1Q9NR63 512 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 RGL1Q9NZL6 768 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 SQORQ9Y6N5 450 aa10.21□□□□□ -0.77
NUP54-207ENST00000508583 ZBTB42B2RXF5 422 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 DGAT1O75907 488 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 C22orf31O95567 290 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 YEATS4O95619 227 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 BRD1O95696 1058 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 CSF2RAP15509 400 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 ITGB8P26012 769 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 UBA7P41226 1012 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 CCL23P55773 120 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 MRPS6P82932 125 aaKnown RBP10.2□□□□□ -0.78
NUP54-207ENST00000508583 CTTNQ14247 550 aaKnown RBP10.2□□□□□ -0.78
NUP54-207ENST00000508583 SLC39A14Q15043 492 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 STK38Q15208 465 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 TARBP2Q15633 366 aaKnown RBP10.2□□□□□ -0.78
NUP54-207ENST00000508583 XKR9Q5GH70 373 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 FAM26DQ5JW98 314 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 ZNF618Q5T7W0 954 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 EFCAB12Q6NXP0 572 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 CATSPER3Q86XQ3 398 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 DNAJB3Q8WWF6 145 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 APBB2Q92870 758 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 CALML4Q96GE6 196 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 CTAGE1Q96RT6 745 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 FTOQ9C0B1 505 aaKnown RBP eCLIP10.2□□□□□ -0.78
NUP54-207ENST00000508583 FAM49AQ9H0Q0 323 aaPredicted RBP10.2□□□□□ -0.78
NUP54-207ENST00000508583 DBR1Q9UK59 544 aaKnown RBP10.2□□□□□ -0.78
NUP54-207ENST00000508583 DNM3Q9UQ16 869 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 AKT3Q9Y243 479 aa10.2□□□□□ -0.78
NUP54-207ENST00000508583 MYH15Q9Y2K3 1946 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 ARHGEF35A5YM69 484 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 PPP6R2O75170 966 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 BAIAP3O94812 1187 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 NASPP49321 788 aaPredicted RBP10.19□□□□□ -0.78
NUP54-207ENST00000508583 KRT85P78386 507 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 HIC1Q14526 733 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 TRIM71Q2Q1W2 868 aaKnown RBP10.19□□□□□ -0.78
NUP54-207ENST00000508583 RUFY4Q6ZNE9 571 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 ANO5Q75V66 913 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 TDHQ8IZJ6 230 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 KRI1Q8N9T8 703 aaKnown RBP10.19□□□□□ -0.78
NUP54-207ENST00000508583 MCPH1Q8NEM0 835 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 TRAPPC12Q8WVT3 735 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 SEPT8Q92599 483 aa10.19□□□□□ -0.78
NUP54-207ENST00000508583 DHX38Q92620 1227 aaKnown RBP10.19□□□□□ -0.78
NUP54-207ENST00000508583 SCLT1Q96NL6 688 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms