RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-209ENST00000506630 PCDHA10Q9Y5I2 948 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 IGKV6D-21A0A0A0MT36 114 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 FAM86C2PA6NEL3 165 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 PI4K2BG5E9Z4 385 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 LPXNO60711 386 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 PARNO95453 639 aaKnown RBP14.78□□□□□ -0.04
TCOF1-209ENST00000506630 CKBP12277 381 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 SELPP16109 830 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 SLC26A2P50443 739 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 JAK3P52333 1124 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 WDR5P61964 334 aaKnown RBP14.78□□□□□ -0.04
TCOF1-209ENST00000506630 TRAF7Q6Q0C0 670 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 LRRC8DQ7L1W4 858 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 MIER3Q7Z3K6 550 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 SPRED2Q7Z698 418 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 TMCO2Q7Z6W1 182 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-209ENST00000506630 SERINC5Q86VE9 423 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 CKAP2LQ8IYA6 745 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 TNPO1Q92973 898 aaKnown RBP14.78□□□□□ -0.04
TCOF1-209ENST00000506630 DISC1Q9NRI5 854 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 GABBR1Q9UBS5 961 aa14.78□□□□□ -0.04
TCOF1-209ENST00000506630 IGSF9BQ9UPX0 1349 aa14.77□□□□□ -0.04
TCOF1-209ENST00000506630 POTEB3A0JP26 581 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 LCHNA4D1U4 455 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 PSMD10O75832 226 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 INSRRP14616 1297 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 ATP2B1P20020 1258 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 SFNP31947 248 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 THPOP40225 353 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 ADAM17P78536 824 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 RBL2Q08999 1139 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 TRIM71Q2Q1W2 868 aaKnown RBP14.77□□□□□ -0.05
TCOF1-209ENST00000506630 POTEBQ6S5H4 581 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 TRMT1LQ7Z2T5 733 aaKnown RBP14.77□□□□□ -0.05
TCOF1-209ENST00000506630 GDPD5Q8WTR4 605 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 KHSRPQ92945 711 aaKnown RBP eCLIP14.77□□□□□ -0.05
TCOF1-209ENST00000506630 RAD9AQ99638 391 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 FOXP1Q9H334 677 aaPredicted RBP14.77□□□□□ -0.05
TCOF1-209ENST00000506630 KCNMB3Q9NPA1 279 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 C11orf16Q9NQ32 467 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 TUBE1Q9UJT0 475 aa14.77□□□□□ -0.05
TCOF1-209ENST00000506630 MYH15Q9Y2K3 1946 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 RRN3P2A6NIE6 340 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 WNT7AO00755 349 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 TBX3O15119 743 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 HBP1O60381 514 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 NEMFO60524 1076 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 NBNO60934 754 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 EFCAB14O75071 495 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 CTSHP09668 335 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 MBTPS1Q14703 1052 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 CALCRLQ16602 461 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 ZNF618Q5T7W0 954 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 CNKSR3Q6P9H4 555 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 ATP8B4Q8TF62 1192 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 TRAPPC12Q8WVT3 735 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 FAM20AQ96MK3 541 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 TGS1Q96RS0 853 aaKnown RBP14.76□□□□□ -0.05
TCOF1-209ENST00000506630 UBE2ZQ9H832 354 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-209ENST00000506630 SUGCTQ9HAC7 445 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 MTUS1Q9ULD2 1270 aa14.76□□□□□ -0.05
TCOF1-209ENST00000506630 ABHD14A-ACY1A0A1B0GW23 586 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 H3BQV1 296 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 GJB5O95377 273 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 BAG4O95429 457 aaKnown RBP14.75□□□□□ -0.05
TCOF1-209ENST00000506630 ATP4AP20648 1035 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 ERVK-21P61565 698 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 UGCGQ16739 394 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 MCTP1Q6DN14 999 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 TAF2Q6P1X5 1199 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 RUFY4Q6ZNE9 571 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 NOSTRINQ8IVI9 506 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 SLFN12Q8IYM2 578 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 GJD3Q8N144 294 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 RDM1Q8NG50 284 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 BBXQ8WY36 941 aaPredicted RBP14.75□□□□□ -0.05
TCOF1-209ENST00000506630 HAS1Q92839 578 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 ZBTB10Q96DT7 871 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 FAM167AQ96KS9 214 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 CD320Q9NPF0 282 aa14.75□□□□□ -0.05
TCOF1-209ENST00000506630 NOL7Q9UMY1 257 aaKnown RBP14.75□□□□□ -0.05
TCOF1-209ENST00000506630 MAFBQ9Y5Q3 323 aaPredicted RBP14.75□□□□□ -0.05
TCOF1-209ENST00000506630 COL1A2P08123 1366 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 XIRP2A4UGR9 3374 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-209ENST00000506630 MBLAC1A4D2B0 266 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-209ENST00000506630 PRR33A8MZF0 331 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 RSPH10B2B2RC85 870 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 CAND2O75155 1236 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 RSPH10BP0C881 870 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 SSTR3P32745 418 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-209ENST00000506630 MCM7P33993 719 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 DEFB103AP81534 67 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 PRKCEQ02156 737 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 PPP2R5CQ13362 524 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 CUL4AQ13619 759 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 IKBKEQ14164 716 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 LEXMQ3ZCV2 418 aa14.74□□□□□ -0.05
TCOF1-209ENST00000506630 MARCH8Q5T0T0 291 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms