RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 USP38Q8NB14 1042 aa17.55■□□□□ 0.4
CLDND1-211ENST00000506575 FAM20AQ96MK3 541 aa17.55■□□□□ 0.4
CLDND1-211ENST00000506575 CELF4Q9BZC1 486 aaKnown RBP17.55■□□□□ 0.4
CLDND1-211ENST00000506575 CHD7Q9P2D1 2997 aa17.55■□□□□ 0.4
CLDND1-211ENST00000506575 ZBTB42B2RXF5 422 aa17.54■□□□□ 0.4
CLDND1-211ENST00000506575 ST18O60284 1047 aa17.54■□□□□ 0.4
CLDND1-211ENST00000506575 BAG4O95429 457 aaKnown RBP17.54■□□□□ 0.4
CLDND1-211ENST00000506575 C22orf31O95567 290 aa17.54■□□□□ 0.4
CLDND1-211ENST00000506575 IGFBP4P22692 258 aa17.54■□□□□ 0.4
CLDND1-211ENST00000506575 TAP1Q03518 808 aa17.54■□□□□ 0.4
CLDND1-211ENST00000506575 MKRN4PQ13434 485 aaPredicted RBP17.54■□□□□ 0.4
CLDND1-211ENST00000506575 EARS2Q5JPH6 523 aaKnown RBP17.54■□□□□ 0.4
CLDND1-211ENST00000506575 METTL13Q8N6R0 699 aa17.54■□□□□ 0.4
CLDND1-211ENST00000506575 CERS4Q9HA82 394 aa17.54■□□□□ 0.4
CLDND1-211ENST00000506575 KCNMB3Q9NPA1 279 aa17.54■□□□□ 0.4
CLDND1-211ENST00000506575 INSL6Q9Y581 213 aa17.54■□□□□ 0.4
CLDND1-211ENST00000506575 SQORQ9Y6N5 450 aa17.54■□□□□ 0.4
CLDND1-211ENST00000506575 FAM205CA6NFA0 338 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 BTBD18B2RXH4 712 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 TBX3O15119 743 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 MAGEB2O15479 319 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 ZNF862O60290 1169 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 UPP2O95045 317 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 CD52P31358 61 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 HMGN5P82970 282 aaKnown RBP17.53■□□□□ 0.4
CLDND1-211ENST00000506575 UGCGQ16739 394 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 KIAA0319LQ8IZA0 1049 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 FAM184AQ8NB25 1140 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 ARNTL2Q8WYA1 636 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 TNFRSF25Q93038 417 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 C8orf76Q96K31 380 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 GINS2Q9Y248 185 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 TRANK1O15050 2925 aa17.53■□□□□ 0.4
CLDND1-211ENST00000506575 KDM3AQ9Y4C1 1321 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.52■□□□□ 0.4
CLDND1-211ENST00000506575 LCHNA4D1U4 455 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 TMOD1P28289 359 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 GUCY1B3Q02153 619 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 PAK2Q13177 524 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 PPP2R5CQ13362 524 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 XKR3Q5GH77 459 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 B3GNT9Q6UX72 402 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 SLFN12Q8IYM2 578 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 TOP1MTQ969P6 601 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 MAP7D2Q96T17 732 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 YME1L1Q96TA2 773 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 FTHL17Q9BXU8 183 aa17.52■□□□□ 0.4
CLDND1-211ENST00000506575 SEPT9Q9UHD8 586 aaPredicted RBP17.52■□□□□ 0.4
CLDND1-211ENST00000506575 ARHGEF15O94989 841 aa17.51■□□□□ 0.39
CLDND1-211ENST00000506575 TBC1D8BQ0IIM8 1120 aa17.51■□□□□ 0.39
CLDND1-211ENST00000506575 ADGRE1Q14246 886 aa17.51■□□□□ 0.39
CLDND1-211ENST00000506575 ODR4Q5SWX8 454 aa17.51■□□□□ 0.39
CLDND1-211ENST00000506575 EFCAB12Q6NXP0 572 aa17.51■□□□□ 0.39
CLDND1-211ENST00000506575 BANK1Q8NDB2 785 aa17.51■□□□□ 0.39
CLDND1-211ENST00000506575 IL27Q8NEV9 243 aa17.51■□□□□ 0.39
CLDND1-211ENST00000506575 AGO3Q9H9G7 860 aaKnown RBP17.51■□□□□ 0.39
CLDND1-211ENST00000506575 VAV3Q9UKW4 847 aa17.51■□□□□ 0.39
CLDND1-211ENST00000506575 PADI3Q9ULW8 664 aa17.51■□□□□ 0.39
CLDND1-211ENST00000506575 AKT3Q9Y243 479 aa17.51■□□□□ 0.39
CLDND1-211ENST00000506575 EYSQ5T1H1 3165 aa17.51■□□□□ 0.39
CLDND1-211ENST00000506575 LINC01553A4QN01 128 aa17.5■□□□□ 0.39
CLDND1-211ENST00000506575 DDX11L8A8MPP1 907 aa17.5■□□□□ 0.39
CLDND1-211ENST00000506575 DKC1O60832 514 aaKnown RBP eCLIP17.5■□□□□ 0.39
CLDND1-211ENST00000506575 VTNP04004 478 aa17.5■□□□□ 0.39
CLDND1-211ENST00000506575 CLCN3P51790 818 aa17.5■□□□□ 0.39
CLDND1-211ENST00000506575 PSMC5P62195 406 aa17.5■□□□□ 0.39
CLDND1-211ENST00000506575 HTRA4P83105 476 aaPredicted RBP17.5■□□□□ 0.39
CLDND1-211ENST00000506575 GNL2Q13823 731 aaKnown RBP17.5■□□□□ 0.39
CLDND1-211ENST00000506575 CALCRLQ16602 461 aa17.5■□□□□ 0.39
CLDND1-211ENST00000506575 PPM1EQ8WY54 764 aa17.5■□□□□ 0.39
CLDND1-211ENST00000506575 HAS1Q92839 578 aa17.5■□□□□ 0.39
CLDND1-211ENST00000506575 TGS1Q96RS0 853 aaKnown RBP17.5■□□□□ 0.39
CLDND1-211ENST00000506575 PPP1R16BQ96T49 567 aa17.5■□□□□ 0.39
CLDND1-211ENST00000506575 SUGCTQ9HAC7 445 aa17.5■□□□□ 0.39
CLDND1-211ENST00000506575 EML1O00423 815 aa17.49■□□□□ 0.39
CLDND1-211ENST00000506575 ENPP3O14638 875 aa17.49■□□□□ 0.39
CLDND1-211ENST00000506575 GTPBP6O43824 516 aaPredicted RBP17.49■□□□□ 0.39
CLDND1-211ENST00000506575 RPS6KA5O75582 802 aa17.49■□□□□ 0.39
CLDND1-211ENST00000506575 QARSP47897 775 aaKnown RBP17.49■□□□□ 0.39
CLDND1-211ENST00000506575 CRYBB1P53674 252 aaPredicted RBP17.49■□□□□ 0.39
CLDND1-211ENST00000506575 NFX1Q12986 1120 aaKnown RBP17.49■□□□□ 0.39
CLDND1-211ENST00000506575 KIZQ2M2Z5 673 aa17.49■□□□□ 0.39
CLDND1-211ENST00000506575 MTERF2Q49AM1 385 aa17.49■□□□□ 0.39
CLDND1-211ENST00000506575 NCAPH2Q6IBW4 605 aa17.49■□□□□ 0.39
CLDND1-211ENST00000506575 LRRC71Q8N4P6 559 aa17.49■□□□□ 0.39
CLDND1-211ENST00000506575 MTUS1Q9ULD2 1270 aa17.49■□□□□ 0.39
CLDND1-211ENST00000506575 RFXAPO00287 272 aa17.48■□□□□ 0.39
CLDND1-211ENST00000506575 NEMFO60524 1076 aa17.48■□□□□ 0.39
CLDND1-211ENST00000506575 P4HBP07237 508 aaKnown RBP17.48■□□□□ 0.39
CLDND1-211ENST00000506575 ATP2B1P20020 1258 aa17.48■□□□□ 0.39
CLDND1-211ENST00000506575 TMEM266Q2M3C6 531 aa17.48■□□□□ 0.39
CLDND1-211ENST00000506575 FAM43BQ6ZT52 329 aaPredicted RBP17.48■□□□□ 0.39
CLDND1-211ENST00000506575 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.48■□□□□ 0.39
CLDND1-211ENST00000506575 ZNF710Q8N1W2 664 aa17.48■□□□□ 0.39
CLDND1-211ENST00000506575 MICALL1Q8N3F8 863 aa17.48■□□□□ 0.39
CLDND1-211ENST00000506575 SP7Q8TDD2 431 aaPredicted RBP17.48■□□□□ 0.39
CLDND1-211ENST00000506575 SCLT1Q96NL6 688 aa17.48■□□□□ 0.39
CLDND1-211ENST00000506575 OSMRQ99650 979 aa17.48■□□□□ 0.39
CLDND1-211ENST00000506575 NIFKQ9BYG3 293 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms